Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2640 107 2e-18 seq1218 104 3e-17 seq852 96.9 4e-15 >seq2640 Length=94256 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| || | |||||||| || | || ||| || |||||||||||||| || Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| |||| || |||||||| ||||| ||||||| | ||| || || | || Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || || ||||| || || ||| | | | | ||||| |||| || || Sbjct 12587 ATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACT 12646 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| || ||||| || ||||| |||||||| ||||| Sbjct 12647 TCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||||| |||| |||| || |||||||| || || || || || Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAG 13210 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || | |||||| ||||| || || | || ||||| || | || Sbjct 13211 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGA 13270 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || || || || ||||| | | | ||||| |||| || || Sbjct 13271 ATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACT 13330 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||| |||||||| || || || || |||||||||||||| |||||| Sbjct 13331 TCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCATT 13378 >seq1218 Length=332501 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||||||||| || || ||||| | || || ||||||||||| || || Sbjct 113784 CTCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCAAA 113725 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | | ||||| || ||| || || | | Sbjct 113724 GATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTGGCTTTCACATT 113665 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || | || || |||| ||||||||| || |||||||| || || || Sbjct 113664 CTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATGGTCTTTCCCGTCAGGGTCTTCAC 113605 Query 46582 AAAGATTTGCAT 46593 ||| || ||||| Sbjct 113604 AAAAATCTGCAT 113593 Score = 100 bits (110), Expect = 3e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| || |||||||| | | | || | ||||| || ||| || || ||||||| Sbjct 114511 ATTAATTTCCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGT 114452 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 ||||||| ||||| || |||| || | |||||| || || || |||| | ||| |||| Sbjct 114451 AGTCGGAAAGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGT 114392 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 ||| ||| | || || |||||| || || || | | | | |||||||| | Sbjct 114391 CGGGCGGAATGCCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGG 114332 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || || || || || |||||||| ||||| |||||||| Sbjct 114331 GCTCTACTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| || || |||||||| || || || || | || ||| Sbjct 113452 ACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCG 113393 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| || || || | |||||||| |||| ||| | | ||||| ||| | Sbjct 113392 AGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGG 113333 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| | || | | | | || || || | ||||| || | || || ||||| Sbjct 113332 ATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTC 113273 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | || ||||| ||||| ||||| Sbjct 113272 CCAGTTAATGTCTTAACGAAGATCTGCAT 113244 >seq852 Length=358492 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| ||| | ||| ||||| ||||| ||||| || || | |||||| |||| || Sbjct 357661 CACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGTGCGACCGTCCTC 357720 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 | ||| || ||||| || ||||||||||||||||| | ||| | | ||||| ||| Sbjct 357721 TAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCTTCCTTATCCTG 357780 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||| || ||| | | | | || ||||| | ||| || |||| || |||||||| Sbjct 357781 GATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAATGGTTTT 357840 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || || | || || || || || |||||| Sbjct 357841 TCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565164516275640