Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq852 122 6e-23 seq2640 104 2e-17 seq1332 93.3 3e-14 >seq852 Length=358492 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||||||||| |||||||| || | || ||||||||| ||||||||||||| Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| || ||||| || ||| |||||||||| | ||| ||||| | ||| Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| || ||| || | | ||| || || | ||| || Sbjct 357536 ATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACT 357595 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| ||||| ||||| || || | |||||| || || || ||||| Sbjct 357596 TCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 114 bits (126), Expect = 9e-21 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| |||||| || |||||||| | || |||||| || || |||||||| | | Sbjct 357872 CCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGAC 357931 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| ||| | || || | ||| || ||| | ||||| || | ||| || || | || Sbjct 357932 AAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGA 357991 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTT---TCC 39669 | |||||||||||| || ||| ||| | || | | ||||| ||||| || Sbjct 357992 ATGCCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCGATTGTGT---CGCTTGGCTCT 358048 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || ||||||||||| || || || |||| |||||| ||||| |||||||| Sbjct 358049 ACCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCAT 358098 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| ||||||| |||||||||| ||| ||||| ||||||||||| | Sbjct 357188 CCACCACGAAGACGAAGTACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCAGAA 357247 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | ||| | || |||||||| || || ||||||| | | ||||||||| | || Sbjct 357248 AGGGTGCGACCGTCCTCCAATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGTGGA 357307 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCT---TTCC 39669 | |||||||| || ||||| ||| | | ||| || | |||| |||| Sbjct 357308 ATACCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATGGTAT---CGCTAGGTTCC 357364 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || ||||| || |||||||| || | ||||| || || || ||||| Sbjct 357365 ACCTCTAAAGTTATAGTTTTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 >seq2640 Length=94256 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || |||| | |||||| | ||| | ||||| ||||| || ||||||||||||| | Sbjct 13607 CCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGAC 13666 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | ||| | || |||||||| || || |||| || || | ||||||||| | || Sbjct 13667 AGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTGGA 13726 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | || || ||||| |||||| || | || | | || || |||||| Sbjct 13727 ATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTTCTCGATCGTATCACTTGGTTCCACT 13786 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||| || || ||||| || || ||||| ||||| |||||||| Sbjct 13787 TCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCAT 13833 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || |||| |||||| |||| ||| ||| ||||| || |||||||| | Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAG 13210 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | || |||| || || || || ||| |||| || | ||| |||||||| | ||| Sbjct 13211 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGA 13270 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCCA 39670 | ||| ||||| || ||||||| || | | ||| ||||| | ||| | | Sbjct 13271 ATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCT--A 13328 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||| ||| || || || || || | |||||| || ||||||||||| Sbjct 13329 CTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 >seq1332 Length=188647 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| |||||| || ||||| || | || |||||||| ||||||||||||| Sbjct 169153 CCTCCTCTCAAACGAAGAACCAAGTGAAGTGTAGATTCTTTTTTAATATTATAATCGGAT 169212 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| || ||||| || ||| |||||||||| | ||| ||||| | ||| Sbjct 169213 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 169272 Query 39613 ACGCCTTCTTTGTC 39626 | ||||||||||| Sbjct 169273 ATACCTTCTTTGTC 169286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347325329589881