Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq344 123 3e-23 >seq344 Length=562330 Score = 123 bits (136), Expect = 3e-23 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 154919 TAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAA 154978 |||| |||| ||| | || |||||| | ||||| || || |||||| | ||||| || || Sbjct 38131 TAGAGAGATCTGTGATATGGTTCATCAGAATGGAGGCCAAGTATATTTAGATGGTGCTAA 38072 Query 154979 TCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCT 155038 | | ||||| || || || | ||| |||| |||||| | ||||||| ||||| Sbjct 38071 TATGAATGCCCAAGTTGGTTTGTGTCGACCTGGTGACTATGGTTCTGATGTATCCCATCT 38012 Query 155039 AAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 || || ||||| ||||| || ||||| |||||||||||||||||||| | ||||| || Sbjct 38011 TAATTTGCATAAGACATTTTGCATTCCTCATGGAGGTGGAGGTCCTGGAATGGGTCCAAT 37952 Query 155099 AGGTGT 155104 || || Sbjct 37951 TGGAGT 37946 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347 || || || |||||||| || ||| ||||||||||| ||||| ||| || ||||| ||| Sbjct 44610 TATACACCATATCAAGCAGAAATAGCTCAGGGAAGACTGGAAAGTTTGTTAAATTATCAA 44551 Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407 || | || | ||| | ||||||||| |||||||| || ||| |||||||||||| Sbjct 44550 ACAATGATAAAAGATATGACAGGATTAGACATAGCAAATGCTTCTTTATTAGATGAAGGC 44491 Query 153408 ACTGCAGCAGCAGAAGCAATG 153428 || || || |||||||| ||| Sbjct 44490 ACAGCTGCTGCAGAAGCTATG 44470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579137089646880