Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq344 149 7e-31 >seq344 Length=562330 Score = 149 bits (164), Expect = 7e-31 Identities = 144/185 (78%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 159595 AGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654 ||| |||| ||| | || |||||| ||||||| || || |||||| | |||||||| ||| Sbjct 38130 AGAGAGATCTGTGATATGGTTCATCAGAATGGAGGCCAAGTATATTTAGATGGTGCTAAT 38071 Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714 | ||||| || || ||| | ||| ||||||||||| | ||||||| ||||| Sbjct 38070 ATGAATGCCCAAGTTGGTTTGTGTCGACCTGGTGACTATGGTTCTGATGTATCCCATCTT 38011 Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774 || || ||||||||||| || ||||| |||||||||||||||||||| | ||||| ||| Sbjct 38010 AATTTGCATAAGACATTTTGCATTCCTCATGGAGGTGGAGGTCCTGGAATGGGTCCAATT 37951 Query 159775 GGTGT 159779 || || Sbjct 37950 GGAGT 37946 Score = 105 bits (116), Expect = 8e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 157963 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 158022 || || || |||||||| || ||| ||||||||||| ||||| ||| || ||||| ||| Sbjct 44610 TATACACCATATCAAGCAGAAATAGCTCAGGGAAGACTGGAAAGTTTGTTAAATTATCAA 44551 Query 158023 ACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCA 158082 || | || | ||| | |||||| || |||||||| || ||| |||||||||||| Sbjct 44550 ACAATGATAAAAGATATGACAGGATTAGACATAGCAAATGCTTCTTTATTAGATGAAGGC 44491 Query 158083 ACTGCAGCAGCAGAAGCAATG 158103 || || || |||||||| ||| Sbjct 44490 ACAGCTGCTGCAGAAGCTATG 44470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587974334357520