Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2640 161 2e-34 seq1218 150 4e-31 seq852 131 4e-25 seq1332 104 5e-17 >seq2640 Length=94256 Score = 161 bits (178), Expect = 2e-34 Identities = 172/226 (76%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | || ||| | ||| | ||||| |||||||||||||||||||| | ||| || Sbjct 12244 TCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGAAAGCGT 12303 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| ||||| || || || || ||||||| || |||||||||||||| || Sbjct 12304 GCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACC 12363 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 ||| |||||||| || || |||||||||||| || ||||| ||| || ||||| Sbjct 12364 TTCCTTGTCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTC---ACTCGGCTCGACTTC 12420 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || || ||||| ||||| ||||| | ||||||| Sbjct 12421 CAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCATT 12466 Score = 147 bits (162), Expect = 5e-30 Identities = 161/213 (76%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || |||||||||||||| |||||||||| ||| || | |||||||| Sbjct 13397 ACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCTTCC 13456 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| |||||||| || ||||| || || ||||| || ||||| ||||| || Sbjct 13457 AATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGG 13516 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 |||||| |||||| || || || ||||| ||| ||| ||||| ||||| | ||| Sbjct 13517 ATTTTTGCCTTGACATTTTCGATTGTGTC---ACTCGGTTCGACTTCCAGGGTGATGGTC 13573 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || | || || ||||| | |||||| Sbjct 13574 TTACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 Score = 145 bits (160), Expect = 2e-29 Identities = 168/225 (75%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||| ||||||||||| || |||||||| || | | || Sbjct 12472 TCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGACAACGT 12531 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| |||||||| || || || || || | ||||| |||||||||||||| Sbjct 12532 GCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGAATGCC 12591 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 |||||||||||| |||||| ||| ||||| || || ||||| ||| || ||||| Sbjct 12592 TTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTC---ACTCGGCTCTACTTC 12648 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | |||||||| || | ||||| Sbjct 12649 TAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 140 bits (154), Expect = 7e-28 Identities = 163/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||||| || || || || ||||| ||||| ||||| || || || | ||||| | || Sbjct 12934 TCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGACAGAGTACGACC 12993 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || || || || || ||||||| ||||| || |||||||| |||||||| Sbjct 12994 ATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGAATTCCTTCTTT 13053 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGT 195101 |||||| |||||| || || ||||| ||||| || ||| |||||||| ||||| Sbjct 13054 GTCTTGGATTTTTGCTTTTACATTCTCGATGGTATC---ACTCGGCTCCACTTCCAGGGT 13110 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| |||| || |||||||| | ||||| Sbjct 13111 GATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 136 bits (150), Expect = 9e-27 Identities = 164/222 (74%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | || || ||||| || ||||||||||| || |||||||| | || || | Sbjct 12704 AGTCTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGA 12763 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || ||||| ||||| ||||| |||||||| || |||||||| || || || || |||||| Sbjct 12764 CCGTCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCT 12823 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099 ||||| ||||| || ||| || || || || ||||| ||| |||||||| | Sbjct 12824 TTGTCCTGAATCTTAGCCTTTACATTTTCGATAGTGTC---ACTGGGCTCCACTTCTAAA 12880 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | |||||||| || | ||||| ||||| | |||||| Sbjct 12881 GTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATCTGCATT 12922 >seq1218 Length=332501 Score = 150 bits (166), Expect = 4e-31 Identities = 166/220 (75%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| |||||||| ||||| ||||| || || |||||||| | || || | ||| Sbjct 114264 TCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCC 114205 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||||| || || || || || ||||| | ||||||||||| ||||||||||||||||| Sbjct 114204 GTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTT 114145 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGT 195101 ||| |||||||| ||| || || ||||| || || ||| ||| ||||| | || Sbjct 114144 GTCCTGAATTTTAGCCTTAACATTTTCAATTGTATC---ACTGGGTTCAACTTCTAAAGT 114088 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || || |||| |||||| || || | ||||||| Sbjct 114087 AATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCATT 114048 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | ||| | || || || |||||||| ||||||||||| |||| |||||| Sbjct 114498 TCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAAAGAGT 114439 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| | |||||| ||||| ||||| |||| |||||||| || |||||||| Sbjct 114438 ACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGAATGCC 114379 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| |||||||| || || || || || ||||| || ||||| || Sbjct 114378 TTCTTTGTCCTGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTACTTCCAG 114319 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | |||||||| || | ||||| || || | |||||| Sbjct 114318 TGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 111 bits (122), Expect = 3e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| || | ||| || || ||||| ||||| || ||||| ||||| || | || || | Sbjct 113462 GAGCCTGAGAACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACG 113403 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| ||||||||||| ||||| ||||| || || || || || || ||||| ||||| Sbjct 113402 ACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTC 113343 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || || || || || || || ||||| || || | ||||| ||||| || Sbjct 113342 CTTATCCTGGATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGT 113283 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || || || || || ||||| | ||||| Sbjct 113282 AATTGTTTTCCCAGTTAATGTCTTAACGAAGATCTGCAT 113244 >seq852 Length=358492 Score = 131 bits (144), Expect = 4e-25 Identities = 154/207 (74%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || || |||||||||||||| ||||||| | || | |||||||| | || Sbjct 357439 GTGAAGCGTAGATTCTTTTTGAATATTATAATCGGATAAGGTGCGACCATCTTCTAATTG 357498 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || | || ||||| || || || || ||||||||||||||||| || Sbjct 357499 CTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCTTGAATCTT 357558 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113 | ||||||||| || ||||| || ||| ||| ||||| | |||| || ||||| Sbjct 357559 TGCCTTGACGTTTTCTATGGTATC---ACTGGGTTCAACTTCCAACGTAATGGTTTTTCC 357615 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 || | |||||| || || | |||||| Sbjct 357616 AGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 123 bits (136), Expect = 6e-23 Identities = 153/208 (74%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || ||||| ||||| || ||||| | | ||| | || |||||||| ||| Sbjct 357896 TGAAGGGTAGATTCTTTCTGAATGTTATAATCAGACAAAGTGCGACCGTCTTCGAGTTGC 357955 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || | | |||||||| || ||||||||||||||||||||||| ||| Sbjct 357956 TTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCTTGAATCTTT 358015 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTCTTTCCT 195114 || || ||||| || ||||| ||| || || || | |||| ||||| || Sbjct 358016 GCTTTTACATTCTCGATTGTGTC---GCTTGGCTCTACCTCCAAAGTAATAGTCTTCCCA 358072 Query 195115 GTCAAAGTTTTTACGAACACTTGCATTT 195142 || | |||||| ||||| | ||||||| Sbjct 358073 GTTAGAGTTTTAACGAAAATCTGCATTT 358100 >seq1332 Length=188647 Score = 104 bits (114), Expect = 5e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || || ||||||| |||||| ||||||| | || | |||||||| Sbjct 169170 AACCAAGTGAAGTGTAGATTCTTTTTTAATATTATAATCGGATAAGGTGCGACCATCTTC 169229 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | ||||| || || || || | || ||||| || || || || |||||||||||||| Sbjct 169230 TAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCTTG 169289 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 ||| ||| || ||||| || |||||||| Sbjct 169290 AATCTTTGCCTATACGTTTTCTATGGTGTC 169319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109332951308519