Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2640 122 6e-23 seq1218 120 2e-22 seq852 111 1e-19 >seq2640 Length=94256 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| ||||| ||||| |||||||||| ||| |||||||| || || ||||||| Sbjct 12465 TTCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCG 12524 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | | | ||| | || || ||||| || ||||||||||| || | || || ||| | | Sbjct 12525 ACAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAG 12584 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || ||||| || || || ||| | |||| | |||| | ||| | Sbjct 12585 GAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTA 12644 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || ||||| || |||||||| || || ||||||||||||||| Sbjct 12645 CTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCATA 12694 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || |||| | ||| |||||||| | || ||| || ||||||||||| || || Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAG 13210 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| || | ||| ||||||||||| || || |||||||| || | || Sbjct 13211 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGA 13270 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| || || || || |||||| | |||| | |||| | ||| || Sbjct 13271 ATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACT 13330 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || ||||| ||||| |||||||| || |||||||||||||| Sbjct 13331 TCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34751 ATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC 34810 |||||| || || | | || ||||||||| | ||| |||||| ||||| || || || Sbjct 12235 ATTTCCACCTCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATC 12294 Query 34811 CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTG 34870 ||||| | || | || || ||||||||||| ||||| || |||| ||||||||| | Sbjct 12295 TGAAAGCGTGCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGG 12354 Query 34871 CGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTC 34930 || | || |||||||| |||||| |||||| | |||| |||| | ||| Sbjct 12355 AGGAATACCTTCCTTGTCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTC 12414 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||||| ||||| || || | || ||||| || || ||||| Sbjct 12415 GACTTCCAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCAT 12465 Score = 98.7 bits (108), Expect = 6e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| || | ||| |||| || | || | |||| ||||||||||||||||||||||| Sbjct 12921 TTCCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCG 12980 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | || | || |||| || | |||||||| ||||| || |||| || || || | | Sbjct 12981 ACAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAG 13040 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTC 34930 | | || || ||||| || || ||| || || || || | |||| | ||| Sbjct 13041 GAATTCCTTCTTTGTCTTGGATTTTTGCTTTTAC--ATTCTCGATGGTATCACTCGGCTC 13098 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||| ||||| ||||| || || ||||| || || ||||||||| Sbjct 13099 CACTTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCATA 13150 >seq1218 Length=332501 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| || | |||||| | |||||| |||| ||| |||||||||||||||||| || | Sbjct 114049 TTCCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTG 113990 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | ||| |||| |||| |||||||| || || ||||| || || || || || ||| | | Sbjct 113989 ACAGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTG 113930 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || || || |||||| ||| || |||| | |||| | ||||| Sbjct 113929 GGATTCCTTCTTTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAA 113870 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||| ||||| || || || | || || ||||| |||||||| Sbjct 113869 CTTCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 Score = 98.7 bits (108), Expect = 6e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 34751 ATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC 34810 ||||||||| |||| || | ||| || || | || ||||||||||| || ||||| Sbjct 114507 ATTTCCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTC 114448 Query 34811 CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTG 34870 ||||| | || | || |||| ||| || || ||||| || |||| || ||||| | Sbjct 114447 GGAAAGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGG 114388 Query 34871 CGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTC 34930 ||| | || || ||||| ||| || ||| || | |||| | || | || ||| Sbjct 114387 CGGAATGCCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTC 114328 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| || ||||| ||||| || || ||||| || |||||| Sbjct 114327 TACTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCATA 114276 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| || ||| | || |||| || ||||| || || ||||| Sbjct 113783 TCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCAAAG 113724 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | || ||||| || || || ||| || Sbjct 113723 ATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTGGCTTTCACATTC 113664 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||||| |||| || ||| || || | || ||||| |||||||| || ||||||||| Sbjct 113663 TCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATGGTCTTTCCCGTCAGGGTCTTCACA 113604 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 113603 AAAATCTGCAT 113593 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || ||| | || |||| || ||||| || || ||||| Sbjct 113434 TCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCGAGCTGCTTGCCTGCAAAG 113375 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || |||| | || ||||| || ||||| ||| || | Sbjct 113374 ATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGGATCTTAGTTTTCACATTT 113315 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| | ||| || || | || || ||||| || || | ||||| || Sbjct 113314 TCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTCCCAGTTAATGTCTTAACG 113255 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 113254 AAGATCTGCAT 113244 >seq852 Length=358492 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||| ||||| ||||| || || | | | || |||| || Sbjct 357434 ACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGATAAGGTGCGACCATCTTCT 357493 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | || ||||||||||| |||| || || || || |||| | || || ||||| | Sbjct 357494 AATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCTTGA 357553 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| | |||| || ||||| || | || ||||||||| Sbjct 357554 ATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACTTCCAACGTAATGGTTTTT 357613 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||| |||||||| || ||||| Sbjct 357614 CCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324592227172296