Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1427 275 7e-69 seq725 158 1e-33 seq1105 129 7e-25 seq8822 120 3e-22 seq224 102 9e-17 >seq1427 Length=229792 Score = 275 bits (304), Expect = 7e-69 Identities = 689/1029 (67%), Gaps = 32/1029 (3%) Strand=Plus/Plus Query 136635 TGACTCCTATTAACCCAATGTTGGCAGAATCATGTGAATCTGTAGATAAAGCATTTAAAA 136694 |||||||| || |||||| | || ||| | ||| |||||||| || || ||||||| Sbjct 217312 TGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTTAAAA 217371 Query 136695 AGTTTCCAAATGGAATATTTGCAGAAATAAAATATGACGGAGAACGTGTACAGGTTCACA 136754 | | ||||| || || | ||| || || |||||||| ||||||||||| || ||||| | Sbjct 217372 AATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTTCATA 217431 Query 136755 AGAATGGAAACCACTTTGCATTTTTTAGTAGAAACATGAAACCCGTAACAAAACATAAAG 136814 | || || || ||| ||| ||||||| ||| | ||||| ||| | | |||||| Sbjct 217432 AAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAACAGCATAAAA 217491 Query 136815 TTGATTATCTTAATGAGTATATACCTAAAGCCTTTAAAAATGTATCATCTCTTATTTTAG 136874 | || | || || | ||| ||||||| ||| || | | | | | ||| | | Sbjct 217492 TATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACTTGATTCTTG 217551 Query 136875 ATTCAGAAATAGTACTAGTAGATAAAAATA---ATAAACCATTACCATTTGGCAGTTTGG 136931 | || ||||| | ||| |||||| ||| | |||||||||| |||||||| | ||| | Sbjct 217552 ACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGTACTTTAG 217611 Query 136932 GTATACATAAAAAGAAGGAATATAATGATTCATCACTATGTTTATTTGTATTTGATTGTT 136991 || | || || |||| | | ||| ||| || | | ||||||||||| ||||||||| Sbjct 217612 GTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTGTTTGATTGTA 217671 Query 136992 TGTTTTTTGATGGGTTTGATATGACAGATATTCCTCTAAATGATAGACGATCGATTCTTC 137051 | | || |||| ||| | | ||| |||||| || || |||||| ||||| | Sbjct 217672 TATATTACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAGACGAAAAATTCTGC 217731 Query 137052 AAGAAATAATAGTAGAAATTCCTAATAGAATAATGTTATCAGAACTATATGTGGTTAAGG 137111 |||||| || | |||| || || || | || || ||| | | | |||| Sbjct 217732 AAGAAAATATGGAAGAAGTTAAAGATCACATTAAATTTTCTGAAATGAAATTTATTAA-- 217789 Query 137112 AAAT--TAATCAATTATCTAATAT-ACTAGATAATGTATTATCACAAAAGTTAGAAGGAT 137168 || | || ||||| | |||| | | || | |||| |||| ||||||||| Sbjct 217790 AACTCGAAAAGAATTAAATGATATGATGACATCA-ATATTCAAACAAGGATTAGAAGGAC 217848 Query 137169 TAGTTGTAAAAGATATCAAT-AGTAGTTATCTTCCAGGAAAAAGAAAATGGTTAAAGATA 137227 | ||| |||||||| || | |||| |||| || |||||| || | ||| | || | Sbjct 217849 TTGTTTTAAAAGAT-CCATTGAGTACTTATAAACCTGGAAAACGACATTGGCTGAAAGTC 217907 Query 137228 AAAAAGGATTATTTGAATAATGGCGCTTTAGCTGATTCTATAGACTTAGTAGTATTAGGT 137287 ||||| |||||| | || | || | ||||| | ||| ||||| || |||||| Sbjct 217908 AAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTAGTTGTTTTAGGT 217967 Query 137288 GCTTATTATGGTAAAGGATCAAAGGGTGGTATAATGGCTGTATTTTTAATGGGATGTTAT 137347 || |||| ||||| || || ||||| || ||| | | ||||||||||| || | Sbjct 217968 GCATATTTTGGTACTGGTAGTAAAGGTGGAATGATGTCAATTTTTTTAATGGGTTGCTTC 218027 Query 137348 GATGATAATGATTGTAAA--TGGAAAACTGTTACAAAATGTTC----AGGACATGATGAT 137401 ||| | | || ||| ||| || ||||| ||| || | ||||||| |||| Sbjct 218028 GATAAGA--CATCCCAAAAGTGGTGTACAGTTACTAAA-GTACATGGAGGACATACTGAT 218084 Query 137402 GAGACGTTAAACTATCTACAAACACATCTAAATATGATAAAAATTAATAAAGATCCCaaa 137461 | ||| | | |||||||| | || | ||| | ||| |||| || || || | Sbjct 218085 GCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTTAACAATGA---CACA 218141 Query 137462 aaaaTTCCTGATTGGTTAATAGTTAATAAA-ATATACTATCCTGATTTTGTAATAAATGA 137520 | || ||| ||||||||| ||||| ||| | || | ||| |||||||| || || Sbjct 218142 GATATCCCTCATTGGTTAAACGTTAAAAAATCTTTAAT-TCCAGATTTTGTTTGTAAAGA 218200 Query 137521 TCCAAAGGAATCACAGGTATGGGAGATAATAGGATCAGATTTTAC--ATCCTCAAAGTTT 137578 |||||| |||||||||||||||||| |||| |||| ||| | | || || | Sbjct 218201 TCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTTCTAAAGCTGAA--GCT 218258 Query 137579 CACACAGCTGCTGGAATATCTATTAGATTTCCCAGGTTTTCTAGAATTAGACACGATAAA 137638 || ||| || |||||||| || || ||||| | || || |||| | | |||||| Sbjct 218259 CATACA---GCAGGAATATCAATAAGGTTTCCTCGTGTTACTTTAATTCGTTATGATAAA 218315 Query 137639 GATTGGAAA 137647 ||||||| Sbjct 218316 ACTTGGAAA 218324 >seq725 Length=361488 Score = 158 bits (174), Expect = 1e-33 Identities = 169/221 (76%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044 || ||||| || || ||||||||| |||||||| |||||||| || || || |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104 ||||| || || | ||||| |||||||||||||| || ||||| ||||| ||||| ||| Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 19105 ACTAGTCTTTCTCCATAACTAGCA-TCATTATTATGAATCCATTTCAGTGCCCAATCAGC 19163 || | | ||||||| | | | | ||| || || ||||| || | |||||| ||||| Sbjct 94866 ACAACACGTTCTCCAAATGTGGAAGTCA-GATCATTTATCCAATTTATTGCCCAGTCAGC 94924 Query 19164 CTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATA 19204 || |||| || || || | ||||||||| | |||||||| Sbjct 94925 TTTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAATA 94965 Score = 158 bits (174), Expect = 1e-33 Identities = 168/218 (77%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404 |||||||||||||| ||||| ||||||||||| ||||| || ||||||||||| |||| Sbjct 98371 ACCAAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATA 98430 Query 19405 AAATGTTTTTCATC-TGAGGTTAATGTATT-CCAATCATTAATATCTTTAGATAAATCTA 19462 ||||| |||||||| | | || | | || ||||| | || ||| || || | || | Sbjct 98431 AAATGCTTTTCATCATCA--TTCAAGAGTTCCCAATGAGAAAGATCCTTTGAAAGGTCAA 98488 Query 19463 CTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGAT 19522 |||||||||| ||||| || ||||| || ||||| || ||||| | ||| |||||| ||| Sbjct 98489 CTTCTTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGAT 98548 Query 19523 ATTGTATAGGAAATATAACAAATCTATTTTTATTTTCT 19560 ||| || ||||| || ||||| | || ||||||| Sbjct 98549 ATTCAATGGGAAAAATGACAAAGCGTCTTGGATTTTCT 98586 >seq1105 Length=277015 Score = 129 bits (142), Expect = 7e-25 Identities = 174/239 (73%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 48115 TATATAACTTCTCAAATTCAT--CCCCATACACATTATCTAACCCAGGACATTCATTAGG 48172 ||||||||| |||||||| | ||||| || | | ||| |||| |||||||| ||| Sbjct 85923 TATATAACTCTTCAAATTCTTTACCCCA-ACTG-TCAAATAATCCAGAACATTCATGAGG 85866 Query 48173 ACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCA 48232 ||||||||| ||||| |||||| || ||||| |||||||| ||| || ||||| Sbjct 85865 ACACATCAACGACCACATATCATCAGCTTCAACTCTTTGCATAAATAAATCGGGAATCCA 85806 Query 48233 AAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTC 48292 ||| || ||||||||| | || | |||||| || || |||| |||| | || Sbjct 85805 AAGTGCATAAAATAAATCACGAGCACGACATTCTTCCTTTCCGGTATTTTTTTTTAAATC 85746 Query 48293 AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTC 48351 |||||| || | ||||| |||||||| ||||| | |||||| || | |||| |||| Sbjct 85745 AAGAAATTCAAAAATATCTGCATGCCACGGTTCCAGATATATAGCAAAGGCACCGGGTC 85687 Score = 125 bits (138), Expect = 8e-24 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 47553 GGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCC 47612 ||||| || | ||||||| ||||||||| | | ||| || |||||||||||||||| Sbjct 91318 GGAGATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGT 91259 Query 47613 AATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGC-TTCTGA-TG 47670 |||| ||||||||| |||||||||||||||| ||| || | ||| ||| |||| | || Sbjct 91258 AATGAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTG 91199 Query 47671 ATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAA 47730 ||||| ||||| || ||||| || || |||||||||||||| || | Sbjct 91198 --TCAAACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTA 91141 Query 47731 TTGGTCTATGAGTTTTATTAGAAAACTCAGC 47761 | || | ||| | | |||||| || || || Sbjct 91140 TGGGACGATGCCTCTGATTAGATAATTCTGC 91110 Score = 116 bits (128), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 |||||||| || |||| ||||| | ||| ||||||||||| || |||||||| ||| Sbjct 100932 TGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTATCGAT 100873 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 |||||||| |||| |||||| ||||| || || || ||||| | || ||| | || ||| Sbjct 100872 TCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAAACTA 100813 Query 47448 TTTCTTACTCCATA 47461 |||||||| ||||| Sbjct 100812 TTTCTTACACCATA 100799 Score = 114 bits (126), Expect = 1e-20 Identities = 122/160 (76%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 47051 CCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATT 47110 ||||||||| ||||||||||| ||||| || |||| | ||||||| ||||||||| || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 47111 AAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCT 47170 | ||| ||||| |||||||| || || || || || || ||||| | | ||| | Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 47171 TTGTGGTATCTCCCATACTGTTTTATA-AATTTGTTTAAT 47209 ||| ||||| ||||| || ||| |||| | ||| |||||| Sbjct 102536 TTGAGGTATTTCCCAAACAGTTCTATACAGTTTTTTTAAT 102497 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 48913 CATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTA 48972 || ||||||| | | ||||||||| ||||||||||| || |||| |||| ||| |||| Sbjct 73872 CACCACTAAAGACTGATTTTGTTTCCTTATGAAGATTGGAAATAGCAATTCGAGCTGCTA 73813 Query 48973 ATATAGCATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATAT 49032 || ||||||||| ||||| ||||||| ||| || ||||||| |||| ||| Sbjct 73812 ATGCAGCATAATCAGGATGTTTTGTTGTCATTGTTGCAGCAGTTTCTGCAACTAAATTAT 73753 Query 49033 C 49033 | Sbjct 73752 C 73752 >seq8822 Length=1639 Score = 120 bits (132), Expect = 3e-22 Identities = 137/184 (74%), Gaps = 9/184 (5%) Strand=Plus/Plus Query 48579 CTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAAC 48638 || |||| ||| || | | ||||| | |||||| | ||| || || |||||| ||||| Sbjct 915 CTCGACAATTGAGGTTTAGGTGTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAAC 974 Query 48639 CATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATA 48698 ||||| || ||||| ||||||||||||||||| ||| ||| || || || |||||| Sbjct 975 CATTTTTCAGATAATAATTTATATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATT 1034 Query 48699 CCTATAGATACACGCATTAACATATATTGAGGTCTTT---CAAC------AATTTTGTTA 48749 || | ||||| ||||| ||||||| || ||||||| |||| |||||| ||| Sbjct 1035 CCGACGGATACTCGCATCAACATATGCTGTGGTCTTTCCGCAACTATTAAAATTTTATTA 1094 Query 48750 TTTA 48753 |||| Sbjct 1095 TTTA 1098 >seq224 Length=538787 Score = 102 bits (112), Expect = 9e-17 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 47540 TCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTC 47599 ||||||| || ||||| |||| || |||| ||||| || || | | || | ||| Sbjct 19394 TCCTTTAGATACTGGAGATTCATTGTAAGTTTCATAAGATCCAAATTGGTGTGCTAATTC 19453 Query 47600 ACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCT 47659 |||||||||||| ||||||| |||||| || |||||||| |||| || || | ||| Sbjct 19454 ACAACTTGCTTCTAATGCACCATAATAAATAGTTTCAAAAATTTGTACATTCAACTTCTG 19513 Query 47660 TGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAAC 47719 ||||||| ||||||||||| |||| ||| || |||||||| || Sbjct 19514 TGCTTCTTCACTATCAAAAGGATATCTCATTAGAATAAATGCATCAGCTAATCCTTGTAC 19573 Query 47720 ACCAATACCAATTGG 47734 || ||| || ||||| Sbjct 19574 ACTAATTCCTATTGG 19588 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 47049 CTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATA 47108 ||||| | ||| ||||||||||| || | || |||| |||| ||| || || ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 47109 TTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACC 47168 | | || || || ||||||||||| ||||||||||| || ||||| | | ||| || Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 47169 CTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 |||| ||||| ||||| || ||| |||| | |||| | || ||||| Sbjct 7680 TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGG 7729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562035325353480