Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq725 154 2e-32 seq1427 129 7e-25 seq546 91.5 2e-13 >seq725 Length=361488 Score = 154 bits (170), Expect = 2e-32 Identities = 166/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || ||||||||| || |||||||| ||||| | ||| || |||| Sbjct 94744 CTTCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTT 94803 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | |||||| ||||||||||| |||||||||||||| || ||||| ||||| ||||||| Sbjct 94804 TTAACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATG 94863 Query 37318 CTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTG 37377 | |||| |||| || || || ||| | |||| ||||| ||| ||| ||| || | Sbjct 94864 CAACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAG 94923 Query 37378 CCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417 | ||| ||| || || | ||| || ||||| || || Sbjct 94924 CTTTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 37563 AAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAA 37622 || |||||||| ||||| ||||||||||| ||||||||||| | |||| |||||| Sbjct 98374 AAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAAAA 98433 Query 37623 TGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCA 37682 || ||||||||| || || ||||| | || ||| ||||| | |||||||| Sbjct 98434 TGCTTTTCATCATCATTCAAGAGTTCCCAATGAGAAAGATCCTTTGAAAGGTCAACTTCT 98493 Query 37683 TCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGT 37742 ||||| ||||| || || || || |||||| ||| |||||| || || Sbjct 98494 TCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATTCA 98553 Query 37743 ATTGGAAATATTACAAA 37759 || ||||| || ||||| Sbjct 98554 ATGGGAAAAATGACAAA 98570 >seq1427 Length=229792 Score = 129 bits (142), Expect = 7e-25 Identities = 356/530 (67%), Gaps = 27/530 (5%) Strand=Plus/Plus Query 142371 TATTAAATAAAGGTTTAGAAGGAGCTATTTTAAAATATCCAAATGA-TATGTATATACCA 142429 |||| || |||| ||||||||| | |||||||| ||||| ||| || |||| ||| Sbjct 217825 TATTCAAACAAGGATTAGAAGGACTTGTTTTAAAAGATCCAT-TGAGTACTTATAAACCT 217883 Query 142430 GGTAAAAGAAAATGGATAAAGATAAAAAGGGATTACTTAAACGATGGTGCAATGGCAGAT 142489 || ||| || | ||| | || | |||| ||||| | | || ||| ||||| || Sbjct 217884 GGAAAACGACATTGGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGAC 217943 Query 142490 TCAGCAGATTTAGTCGTATTGGGTGCATATTATGGTAAAGGTAAAAGATATGGAGGGATA 142549 ||||||||||| || || |||||||||| ||||| ||| || | || || || Sbjct 217944 AGTGCAGATTTAGTTGTTTTAGGTGCATATTTTGGTACTGGT---AGTAAAGGTGGAATG 218000 Query 142550 ATGTCTATATTTCTTATGGGTTGTTATGATGAAGATA-CAAATACATGGAAAACTGTTAC 142608 ||||| || ||| | |||||||| | ||| |||| | | | | ||| || ||||| Sbjct 218001 ATGTCAATTTTTTTAATGGGTTGCTTCGAT-AAGACATCCCAAAAGTGGTGTACAGTTAC 218059 Query 142609 AAAATGTTC----AGGATTCAATGATGAAACATTAAAGGAATTACAGTC--AATT-GATA 142661 ||| || | |||| | ||||| | ||| | ||||||| | |||| || | Sbjct 218060 TAAA-GTACATGGAGGACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACA 218118 Query 142662 TGATAAAAATCAGTAAAAATAAAGATAAAATACCAACATGGTTAAATATTAACAGTATAC 142721 || | ||| | | || | | |||| || || |||||||| |||| | | | Sbjct 218119 TGGTGAAAGTTAACAATGACACAGAT---ATCCCTCATTGGTTAAACGTTAAAA--AATC 218173 Query 142722 ATTA--TCCAGATTTTATTGTTAATAATCCAAAAACATCACCTGTTTGGGAAATATCCGG 142779 ||| |||||||||| || ||| ||||||||||||||| || ||||| || | || Sbjct 218174 TTTAATTCCAGATTTTGTTTGTAAAGATCCAAAAACATCACAGGTATGGGAGATTGCAGG 218233 Query 142780 ATATGAATTTACAAAATCACCATCTCATACAGCAGATGGGATATCTATTAGATTTCCTAG 142839 | |||||| | ||| | | ||||||||||| || ||||| || || |||||| | Sbjct 218234 AGCAGAATTTTCTAAAGCTGAAGCTCATACAGCA---GGAATATCAATAAGGTTTCCTCG 218290 Query 142840 ATGTAAAAAT-ATAAGAAATGATAAAGATTGGTTATCTGCAACAAATTTA 142888 ||| | | || | |||||||| |||| | ||||||| |||| Sbjct 218291 -TGTTACTTTAATTCGTTATGATAAAACTTGGAAAGAGGCAACAACTTTA 218339 >seq546 Length=477121 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 153297 CATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCTAATATGGAT 153356 || || |||||||||||| | |||||| ||||| | ||||| |||||||| ||||||||| Sbjct 78866 CACACTAAATTTTGGATAATAGATAATCAACATTTCTATATTGGAAGTGCAAATATGGAT 78807 Query 153357 TGGAGATCACTAACTCAAGT 153376 |||||| | |||||||| || Sbjct 78806 TGGAGAGCTCTAACTCAGGT 78787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592239376790280