Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1218 168 5e-37 seq2640 161 8e-35 seq852 161 8e-35 seq1332 140 3e-28 seq926 87.8 1e-12 >seq1218 Length=332501 Score = 168 bits (186), Expect = 5e-37 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 |||||||||||| | | | ||||||||| ||||| || ||||| || |||||||| || Sbjct 114507 ATTTCCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTC 114448 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 || | ||| | | || ||||| ||||| |||||||| |||| | |||||| ||||| Sbjct 114447 GGAAAGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGG 114388 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 ||||||||||||||| || |||||||| ||||||| |||||| ||||| | || Sbjct 114387 CGGAATGCCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTC 114328 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || | || || ||||| | ||||| |||||||| ||||| Sbjct 114327 TACTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 150 bits (166), Expect = 1e-31 Identities = 165/218 (76%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 101253 AACGTAA-AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 ||| ||| ||| |||||||| || |||||||| || || || ||||| | | |||| | Sbjct 114038 AACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGACAGGGTTCGG 113979 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| |||| ||||| || ||||| |||| |||||||||||| || || || |||||| Sbjct 113978 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGGATTCCTTCT 113919 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 ||||| ||||| || ||||||| | |||| ||| ||| | || ||||| | || Sbjct 113918 TTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAACTTCCAAGGTA 113859 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||| || || ||||| |||||||||||||| Sbjct 113858 ATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 Score = 134 bits (148), Expect = 1e-26 Identities = 154/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAG--TTCTGGCATCGTCCAATT 101324 ||||| || |||||||| || || |||||||| |||||| | | | || |||| || Sbjct 114251 TGAAGCGTGGATTCTTTCTGGATGTTGTAATC--CGATAGGGTGCGCCCGTCTTCCAGTT 114194 Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 | || || ||||| || ||||| ||||| ||||| |||||||||||||| || ||||||| Sbjct 114193 GTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATTT 114134 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | || ||| |||| | || ||| | ||| ||||| | ||| | |||||||| | Sbjct 114133 TAGCCTTAACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAG 114074 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | | |||||| |||||||| ||||| Sbjct 114073 TCAGAGTTTTGACAAATATTTGCAT 114049 Score = 120 bits (132), Expect = 2e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||| || ||||| || || || || ||||| || | | || | |||| || Sbjct 113453 AACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTC 113394 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| |||||||| || | |||||| |||||||||||||| ||||| ||||| || Sbjct 113393 GAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTG 113334 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || ||| ||| |||| | || ||| | ||||| |||||||| | ||||| Sbjct 113333 GATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTT 113274 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || || || || ||||||||| Sbjct 113273 CCCAGTTAATGTCTTAACGAAGATCTGCATG 113243 >seq2640 Length=94256 Score = 161 bits (178), Expect = 8e-35 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| || | || || || |||||||| || ||||| || |||||||| || | Sbjct 12465 TTCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCG 12524 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | | || || | ||||| || |||||||||| | ||||||||| || | Sbjct 12525 ACAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAG 12584 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 ||||||||||||| ||||| |||||| ||||| |||||| ||||||| || || | Sbjct 12585 GAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTA 12644 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| ||||||| || || || || | ||||||||||| |||||||| Sbjct 12645 CTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || || || || || || || ||||| ||||| || || ||||| | | Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAG 13210 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || || ||||| || ||||| || | ||| || ||||| || ||| Sbjct 13211 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGA 13270 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| ||||||||||| |||||| || || |||||| ||||||| || || ||| Sbjct 13271 ATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACT 13330 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||||| || || ||||| | |||||| ||||| |||||||| Sbjct 13331 TCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| || |||||||| || |||||||| | | || | | || || | || Sbjct 12718 ATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGACCGTCTTCTAGCTG 12777 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||||| || || |||| ||| ||||||||||| || || |||||||| || ||||| || Sbjct 12778 TTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTGTCCTGAATCTT 12837 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 |||||| |||| | ||||||| | |||||||| | ||||| || || ||||| Sbjct 12838 AGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATGGTCTTTCCGGT 12897 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 12898 AAGTGTTTTCACGAAGATCTGCAT 12921 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || ||||| || ||||| ||||||| | ||| | | || |||||||| Sbjct 13630 ATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGACAGAGTGCGCCCGTCTTCCAATTG 13689 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| ||||| | ||| |||||||| ||||| || || || ||||| ||||| Sbjct 13690 CTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTGGAATTCCCTCCTTGTCTTGGATTTT 13749 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || || | || | || ||| | ||||||||| | ||||| || || || || Sbjct 13750 TGCCTTCACGTTCTCGATCGTATCACTTGGTTCCACTTCCAAAGTGATAGTCTTACCAGT 13809 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 || ||||| || ||||||||||| Sbjct 13810 CAACGTTTTCACGAATATCTGCAT 13833 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 |||||| ||||| | ||| | ||| || || | ||| ||||||||||| ||||||||||| Sbjct 12235 ATTTCCACCTCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATC 12294 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | | || | | | || || | || || || ||||| || | | ||| || || || Sbjct 12295 TGAAAGCGTGCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGG 12354 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 ||||| ||||| || ||||| || || || || | || | |||||| || || Sbjct 12355 AGGAATACCTTCCTTGTCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTC 12414 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || | ||||| || || || ||||| || ||||| ||||| Sbjct 12415 GACTTCCAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCAT 12465 >seq852 Length=358492 Score = 161 bits (178), Expect = 8e-35 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| ||||| | ||| |||||||||||||||||||| || || || ||||| | Sbjct 357870 TTCCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAG 357929 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | || || | |||||| || || || ||||| | |||||| ||||||| Sbjct 357930 ACAAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCG 357989 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 ||||||||||||| |||||||| ||| ||||||| | || | ||||| | || | Sbjct 357990 GAATGCCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTA 358049 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | ||| | || || || |||| |||||| || || |||||||| Sbjct 358050 CCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCAT 358098 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| ||||| | || || ||||| |||||||||||||| ||||| ||||||| Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || |||||||| || ||||| || || | ||||||||||||||| Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||| ||| || || |||||| || ||| | ||| ||| Sbjct 357536 ATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACT 357595 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | ||||| || || | |||||| |||||||| ||||| Sbjct 357596 TCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 |||||| || | | ||| | || | ||| | || ||||| ||||| ||||| ||||| Sbjct 357184 ATTTCCACCACGAAGACGAAGTACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATC 357243 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | | || | | || ||||||||||| |||||||| || | | ||| ||||| || Sbjct 357244 AGAAAGGGTGCGACCGTCCTCCAATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGG 357303 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 ||||| |||||||||||||| ||||| ||||||| |||||| || || | ||| Sbjct 357304 TGGAATACCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATGGTATCGCTAGGTTC 357363 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || | ||| | ||||| || || | ||||| |||||||| ||||| Sbjct 357364 CACCTCTAAAGTTATAGTTTTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 >seq1332 Length=188647 Score = 140 bits (154), Expect = 3e-28 Identities = 133/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| ||||| | ||| || ||||| ||||||||||||| ||||| ||||||| Sbjct 169151 TTCCTCCTCTCAAACGAAGAACCAAGTGAAGTGTAGATTCTTTTTTAATATTATAATCGG 169210 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| || |||||||| || ||||| || || | |||||||||||||| Sbjct 169211 ATAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCG 169270 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCA 101410 | || |||||||| |||||||| ||| | ||| |||||| |||||| Sbjct 169271 GTATACCTTCTTTGTCTTGAATCTTTGCCTATACGTTTTCTATGGTGTCA 169320 >seq926 Length=287075 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 ||| |||||||||||||| ||||| || ||| |||||| || || || | || || Sbjct 189804 AATACCTTCTTTATCTTGTATTTTGGCCTTCACATTTTCTATTGTATCTGAAGGCTCAAC 189863 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| | ||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 189864 TTCCAAAGTGATAGTCTTGCCAGTTAATGTTTTTACAAAAATCTGCAT 189911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396227896423149