Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq2640 109 5e-19 seq852 109 5e-19 >seq2640 Length=94256 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || ||||| ||| | || || || ||||| ||| ||| ||| || Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || ||||||| |||||||| ||| | || |||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||||||||| ||||| || |||||||| |||||| | ||| || | || |||||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| |||||||| || || || | ||| | ||||| || || || || Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGGAAT 12920 Score = 89.7 bits (98), Expect = 4e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 28630 TCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTG 28689 ||||| |||||| || |||||||| | ||| ||||| || | |||||||||| Sbjct 13301 TCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCAGCAACGTCTTATCTTTG 13242 Query 28690 CGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTA 28749 | || || || || |||||| | || | | ||||||||||||||||| ||||| | Sbjct 13241 CCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAACATTCAAAAGGAATCGA 13182 Query 28750 CTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||| ||||||| || | |||| || || Sbjct 13181 CTCTGCACTTGGTATTGCGACTGAGAGGTGGTAT 13148 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| ||||| || ||||| || || ||||| || || || ||| |||||| Sbjct 13834 AATGCAGATATTCGTGAAAACGTTGACTGGTAAGACTATCACTTTGGAAGTGGAACCAAG 13775 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || ||| | | | | ||| ||||||| ||||| |||||| | || ||||| Sbjct 13774 TGATACGATCGAGAACGTGAAGGCAAAAATCCAAGACAAGGAGGGAATTCCACCCGATCA 13715 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 |||||| | |||||||| || || ||||||||||| ||| || |||||||||| Sbjct 13714 GCAGAGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACTCTGTCCGATTATAA 13655 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || ||||| || || || | ||| | ||| | || ||||| || Sbjct 13654 TATCCAGAAAGAGAGCACACTTCATCTCGTACTGAGACTGCGTGGAGGAAT 13604 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || || || || || | || ||||| ||||| ||| ||| ||||| Sbjct 13606 AATGCAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAG 13547 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || ||||| ||||||| ||||| || ||| | || ||||| Sbjct 13546 TGACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCA 13487 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || | || ||||| || || ||||||||||||||| | || | ||||||| || Sbjct 13486 GCAACGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAA 13427 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762 |||||||||||| || || || || |||| Sbjct 13426 CATTCAAAAAGAGTCGACCCTTCATCTGGT 13397 >seq852 Length=358492 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| ||||| | || || ||||||||||| ||| ||||| Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | ||||| ||| || |||||||| || | || |||||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | || ||||| || || ||||| |||||| | || | |||||||||| Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 357463 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||||| || ||| ||||| | | || ||||| || || Sbjct 357462 ATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGGTAT 357413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425350584418203