Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq344 149 7e-31 >seq344 Length=562330 Score = 149 bits (164), Expect = 7e-31 Identities = 144/185 (78%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | |||||||||||||||||||| ||||| || ||||||||||| Sbjct 37946 ACTCCAATTGGACCCATTCCAGGACCTCCACCTCCATGAGGAATGCAAAATGTCTTATGC 38005 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| ||||| ||||||| | ||||||||||| ||| | ||| || || ||| Sbjct 38006 AAATTAAGATGGGATACATCAGAACCATAGTCACCAGGTCGACACAAACCAACTTGGGCA 38065 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| |||||||| | |||||| || || ||||| | |||||| || | ||| ||| Sbjct 38066 TTCATATTAGCACCATCTAAATATACTTGGCCTCCATTCTGATGAACCATATCACAGATC 38125 Query 138363 TGTCT 138367 | ||| Sbjct 38126 TCTCT 38130 Score = 105 bits (116), Expect = 8e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || ||||| || || || |||||||||||| ||| || |||||||| |||||| Sbjct 44470 CATAGCTTCTGCAGCAGCTGTGCCTTCATCTAATAAAGAAGCATTTGCTATGTCTAATCC 44529 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||| | ||| | || | ||||| ||||| || ||| ||||| ||||||||||| ||| Sbjct 44530 TGTCATATCTTTTATCATTGTTTGATAATTTAACAAACTTTCCAGTCTTCCCTGAGCTAT 44589 Query 139979 CTCAGCTTGATAGGGAGTGTA 139999 || |||||||| || || || Sbjct 44590 TTCTGCTTGATATGGTGTATA 44610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578922717671640