Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq852 183 5e-41 seq2640 158 2e-33 seq1332 141 2e-28 seq1218 140 6e-28 seq926 105 1e-17 >seq852 Length=358492 Score = 183 bits (202), Expect = 5e-41 Identities = 182/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| ||| |||||||||| || | |||| ||||| ||||||| Sbjct 357407 ATTTGCATACCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTA 357466 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || |||||||| || | | ||| |||||||| ||||||||||||||||||||||||||| Sbjct 357467 TAATCGGATAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGA 357526 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || ||||| |||||||| ||||| || || | || | ||| || ||||| Sbjct 357527 TCGGGCGGTATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTG 357586 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||||| | || || ||||| || || || ||||| |||||||||||||| Sbjct 357587 GGTTCAACTTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 167 bits (184), Expect = 4e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||||||||||||||| || | || || |||||||| || || | || | | Sbjct 357200 CGAAGTACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCAGAAAGGGTGCGACCG 357259 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||| ||||| |||||||| | ||||| |||||||| || || ||||||||| Sbjct 357260 TCCTCCAATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGTGGAATACCTTCTTTA 357319 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||| | ||||| |||| || |||||| || || || |||| ||||||| Sbjct 357320 TCTTGGATTTTAGCTTTTACATTTTCTATGGTATCGCTAGGTTCCACCTCTAAAGTTATA 357379 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || ||||| |||||||||||||| Sbjct 357380 GTTTTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 Score = 116 bits (128), Expect = 7e-21 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | ||||| ||| |||| ||| | |||| || || || || Sbjct 357635 ATTTGCATCCCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTG 357694 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || || || | | || ||||| ||||| ||||||||||| || | ||| || Sbjct 357695 TAATCTGACAAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGG 357754 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || |||||||| ||||| || ||||||| |||| ||| ||||||||| Sbjct 357755 TCAGGCGGGATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTT 357814 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || || || | ||| || ||||| || |||| || || || || || |||||| Sbjct 357815 GGTTCTACCTCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 >seq2640 Length=94256 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | ||||| ||||| ||||| | ||| | ||||| ||| |||||||| Sbjct 12920 ATTCCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCC 12979 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| |||||||||||||| |||||||| | |||||||||||||||| Sbjct 12980 GACAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGA 13039 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| ||||| ||||| | ||||| ||| || ||||| | ||| Sbjct 13040 GGAATTCCTTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGCTCC 13099 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || || || ||||| || || ||||| Sbjct 13100 ACTTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 132 bits (146), Expect = 9e-26 Identities = 171/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || |||||||||| | |||| || | || | |||||| ||||| Sbjct 12458 ATTTGCATTCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTG 12517 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || ||||| | || |||| || || |||||||| || | ||||||||| Sbjct 12518 TAGTCCGACAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGA 12577 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || |||||||| ||||||||||| | |||| ||| ||||| || Sbjct 12578 TCTGGAGGAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTC 12637 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| ||||||||||| || || || || || || ||||||||||| || ||||| Sbjct 12638 GGCTCTACTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 123 bits (136), Expect = 4e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| ||| | ||||| |||| || | || || ||| ||||| || Sbjct 13148 ATACCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCA 13207 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| ||||| || ||||||||||| || | | || |||||||| Sbjct 13208 GAGAGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGG 13267 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||||||||||||||| | || | ||| ||||| || | ||| Sbjct 13268 GGAATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCT 13327 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| ||||| || || || || || || ||||| ||||| || |||||| Sbjct 13328 ACTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCATT 13378 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 |||||||| | || || |||| || || || | ||||| |||||| || || || Sbjct 12239 CCACCTCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGAA 12298 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | ||| | || |||| |||||||| |||||||| | |||||| || || ||||| Sbjct 12299 AGCGTGCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGGA 12358 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || ||||| || |||||||| || | || | || || || || | ||| ||| Sbjct 12359 ATACCTTCCTTGTCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGACT 12418 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||| |||||||| || | ||||| || |||||||||||| Sbjct 12419 TCCAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCATT 12466 >seq1332 Length=188647 Score = 141 bits (156), Expect = 2e-28 Identities = 119/146 (82%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || |||||||| ||||| |||| || | ||||| ||||| ||||||||| ||| Sbjct 169150 ATTCCTCCTCTCAAACGAAGAACCAAGTGAAGTGTAGATTCTTTTTTAATATTATAATCG 169209 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | | ||| |||||||| ||||||||||||||||||||||||||||| || Sbjct 169210 GATAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGC 169269 Query 193251 GGTATTCCTTCTTTATCTTGTATTTT 193276 ||||| |||||||| ||||| || || Sbjct 169270 GGTATACCTTCTTTGTCTTGAATCTT 169295 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 193210 CTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTT 193269 |||| ||||| ||||||||||| || | ||| || ||| || |||||||| ||||| | Sbjct 169001 CTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCATACGGGATTCCTTCCTTATCCT 169060 Query 193270 GTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTT 193329 | ||||||| ||||| ||| ||||||||| | || || || | ||| || |||| Sbjct 169061 GGATTTTGGCTTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAATGGTTT 169120 Query 193330 TACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || |||| || || || || || |||||| Sbjct 169121 TTCCAGTTAATGTCTTCACGAAAATCTGCATT 169152 >seq1218 Length=332501 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || ||||||| || || || | ||||| || | |||||| |||||| |||||||| Sbjct 114503 CCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAA 114444 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | || | | || || || || || || ||||| || | ||||||||| || || || Sbjct 114443 AGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGA 114384 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || |||||||| || || ||||| | ||||| |||| || || ||| | ||| ||| Sbjct 114383 ATGCCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTACT 114324 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || |||||||| || || || |||||||| |||||||||||||| Sbjct 114323 TCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | ||||| || || || || | || | ||||| || || Sbjct 114284 ATTTGCATACCACCACGCAATCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTG 114225 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || |||| || | || || | ||||||||| ||||| ||||| | ||||| Sbjct 114224 TAATCCGATAGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGG 114165 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || |||||||| || || ||||| | || | |||| ||| ||||| Sbjct 114164 TCGGGAGGAATGCCTTCTTTGTCCTGAATTTTAGCCTTAACATTTTCAATTGTATCACTG 114105 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | |||||||||| ||| |||||||| || || || ||||| ||||||||||||||| Sbjct 114104 GGTTCAACTTCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCATT 114048 Score = 116 bits (128), Expect = 7e-21 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | ||| | ||| |||| ||| | ||| | ||||| ||| ||| Sbjct 114056 ATTTGCATTCCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTA 113997 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | |||| ||| || | || || || ||||| || | | ||||||| Sbjct 113996 TAATCTGACAGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGA 113937 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || |||||||||||||| || || |||| ||||| ||| |||||||| Sbjct 113936 TCTGGTGGGATTCCTTCTTTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTT 113877 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | ||||||||| | || || || || || || | ||||| |||||||| |||||| Sbjct 113876 GGCTCAACTTCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCATT 113820 >seq926 Length=287075 Score = 105 bits (116), Expect = 1e-17 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || |||||||||||||||||||||| || | |||| || ||||| |||| ||||||| Sbjct 189805 ATACCTTCTTTATCTTGTATTTTGGCCTTCACATTTTCTATTGTATCTGAAGGCTCAACT 189864 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATT 193366 || | ||| ||||| || || |||| ||||||||||| || |||||||| || Sbjct 189865 TCCAAAGTGATAGTCTTGCCAGTTAATGTTTTTACAAAAATCTGCATTTTTTT 189917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899536803924240