Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq852 134 2e-26 seq1218 127 3e-24 seq2640 125 1e-23 seq1332 87.8 3e-12 seq725 87.8 3e-12 >seq852 Length=358492 Score = 134 bits (148), Expect = 2e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | ||||| | ||||||||||| ||||| || ||||| ||| | Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || |||||| || || || ||||| |||||||| ||||| || || ||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||||| |||| |||||| ||||| | |||||| | || ||||| ||||||||| Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 357463 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || ||||| | |||||||| || || Sbjct 357462 ATTCAAAAAGAATCTACGCTTCACTTGGT 357434 Score = 104 bits (114), Expect = 3e-17 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| ||||||| ||||||| |||||||| || ||||| || ||| | Sbjct 357414 ATGCAAATATTTGTTAAAACCCTGACTGGTAAAACTATAACTTTAGAGGTGGAACCTAGC 357355 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||| || ||| |||||| |||||||||||||| || || || || || Sbjct 357354 GATACCATAGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAG 357295 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | |||| ||| || ||||| | || || | || | || ||||||| Sbjct 357294 CAGAGGCTTATTTTTGCAGGAAAGCAATTGGAGGACGGTCGCACCCTTTCTGATTATA-- 357237 Query 156003 ATATCCAAA 156011 ||||||||| Sbjct 357236 ATATCCAAA 357228 Score = 102 bits (112), Expect = 1e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | || ||||| ||||||||||| ||||| || || || ||| Sbjct 357871 AATGCAGATTTTCGTGAAGACATTAACTGGAAAAACCATTACTTTGGAGGTAGAACCAAG 357812 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| |||||| || ||||| || ||||| ||||| || || || || || Sbjct 357811 CGATACTATCGAAAACGTAAAGGCCAAAATCCAGGATAAGGAAGGAATCCCGCCTGACCA 357752 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || | ||||||| ||||||||| ||| | || || | ||||| |||||||| || Sbjct 357751 GCAGCGCTTGATTTTTGCCGGTAAACAGTTAGAGGACGGTCGCACTTTGTCAGATTACAA 357692 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040 || || || | ||||| ||||| ||| | ||||| Sbjct 357691 CATCCAGAAGGAATCTACGCTCCATTTGGTGCTTAGATT 357653 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| || || ||||||| | ||||| || |||||||| || || || || Sbjct 358101 AAAATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTAGAGCCA 358042 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || | || || || ||| || || ||||| ||||||||||| || || || Sbjct 358041 AGCGACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCGCCCGAC 357982 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||| || ||||||| ||||| ||||| |||||||| | ||||| || |||||| Sbjct 357981 CAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCTGATTAT 357922 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || ||||| | || |||||||| || | | || ||||| || Sbjct 357921 AACATTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGG 357872 >seq1218 Length=332501 Score = 127 bits (140), Expect = 3e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| |||||| ||||||| |||||||| || || ||||| || ||||| || Sbjct 113820 AATGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAG 113879 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| ||| || || ||| || || || ||||||||||| || || ||||| || Sbjct 113880 TGATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCA 113939 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| | |||| | ||| || |||||||| |||||| | |||| | ||||||||||| Sbjct 113940 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAA 113999 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || ||||| |||| |||||||| || Sbjct 114000 CATTCAGAAAGAATCGACACTTCATTTGGT 114029 Score = 120 bits (132), Expect = 4e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||||||| | ||||| ||||||| ||||||||||| |||||||| ||| Sbjct 114048 AATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAG 114107 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| ||| ||| || || |||||| || || ||||||||||| ||||| || || Sbjct 114108 TGATACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCA 114167 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| | || || | ||| || || || || ||||| | || |||| ||||| || Sbjct 114168 ACAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCGGATTACAA 114227 Query 156002 TATATCCAAAGAGGCGACGCTTCA 156025 || ||||| | |||||||| Sbjct 114228 CATCCAGAAAGAATCCACGCTTCA 114251 Score = 107 bits (118), Expect = 3e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | ||||| | || ||||| ||||| ||| | ||||| || Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||| || ||| |||||| || || ||||||||||| || || || ||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| |||| | ||| || |||||| | ||||| | ||| | || || || ||| Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || |||||| |||| || |||||||| | ||| | ||||| || Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGG 114503 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| ||||| ||||| ||||| ||||| | || || || | | Sbjct 113244 ATGCAGATCTTCGTTAAGACATTAACTGGGAAAACAATTACTCTTGAGGTGGAGCCTAGT 113303 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||| ||||||| ||| || || ||||| ||||| || || || || || Sbjct 113304 GATACAATTGAAAATGTGAAAACTAAGATCCAGGATAAGGAAGGTATTCCGCCCGATCAG 113363 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | | || | ||| || ||||||||||| ||| Sbjct 113364 CAGCGTCTCATCTTTGCAGGCAAGCAGCTCGAGGAT 113399 >seq2640 Length=94256 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | |||||| | || || || || || || ||||||| || | Sbjct 12693 ATGCAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGAGCCGAGT 12634 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||| || ||||||||||| ||||||||||| |||||||| ||| Sbjct 12633 GACACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAA 12574 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | |||||| |||||||| ||||| | || || || || || ||| Sbjct 12573 CAGAGGCTGATATTTGCCGGGAAGCAGCTAGAAGACGGACGCACGTTGTCGGACTACAAT 12514 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || |||||| | || ||||| || ||||| ||||| ||||| || Sbjct 12513 ATCCAGAAAGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGAGG 12467 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||||||||| | |||||||||||||| ||||| || ||| | |||||||| Sbjct 12466 AATGCAAATATTCGTGAAAACATTGACTGGTAAAACAATAACACTGGAAGTCGAGCCGAG 12407 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | || ||||| || || |||||||| || ||||| || |||||||| || Sbjct 12406 TGACACGATCGAGAACGTCAAGGCGAAGATACAAGACAAGGAAGGTATTCCTCCAGACCA 12347 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || ||| | |||| ||| || || ||||| ||||| | | || | |||||||| || Sbjct 12346 GCAGAGACTTATTTTTGCGGGAAAACAGCTAGAAGACGGCCGCACGCTTTCAGATTACAA 12287 Query 156002 TAT 156004 ||| Sbjct 12286 TAT 12284 Score = 95.1 bits (104), Expect = 2e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| ||||| | ||||| |||||||| || ||||| || || ||||| ||| Sbjct 13834 AATGCAGATATTCGTGAAAACGTTGACTGGTAAGACTATCACTTTGGAAGTGGAACCAAG 13775 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| || |||||||| ||||| ||||| || || || || || || || || Sbjct 13774 TGATACGATCGAGAACGTGAAGGCAAAAATCCAAGACAAGGAGGGAATTCCACCCGATCA 13715 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || |||||||| | ||| || ||||| | ||||| | ||| | || |||||||| Sbjct 13714 GCAGAGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACTCTGTCCGATTATAA 13655 Query 156002 TATATCCAAAGAGGCGACGCTTCAT 156026 ||| |||||| || |||||| Sbjct 13654 TATCCAGAAAGAGAGCACACTTCAT 13630 Score = 93.3 bits (102), Expect = 6e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| ||||||| | || ||||| || || || | ||||| || Sbjct 13378 AATGCAGATCTTTGTTAAAACTCTCACCGGAAAGACCATCACTCTGGAAGTAGAGCCGAG 13319 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| |||||| || ||||||||||||||||| ||||| || || || || Sbjct 13318 TGACACTATAGAAAACGTCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCA 13259 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| | | || | |||||| |||||| | |||||| | || | || |||||||| Sbjct 13258 GCAACGTCTTATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAA 13199 Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| || |||| || || || || || || | ||||| ||| Sbjct 13198 CAT-TCAAAAGGAATCGACTCTGCACTTGGTATTGCGACTGAGAGGTGGT 13150 >seq1332 Length=188647 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966 || || ||||| |||||||| ||||| || || ||||| ||||| |||| |||||| ||| Sbjct 169295 AAGATTCAAGACAAAGAAGGTATACCGCCCGATCAACAGAGATTAATTTTTGCCGGAAAG 169236 Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCAT 156026 || | |||||| | || ||||| ||||||||||| ||||| | || ||||| Sbjct 169235 CAATTAGAAGATGGTCGCACCTTATCCGATTATAATATTAAAAAAGAATCTACACTTCAC 169176 Query 156027 TTAGTGTTAAGATTAAGAGGCGG 156049 || || | | || ||||| || Sbjct 169175 TTGGTTCTTCGTTTGAGAGGAGG 169153 >seq725 Length=361488 Score = 87.8 bits (96), Expect = 3e-12 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 18180 CTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCtttttt 18239 ||||||||||| |||||||| ||||| || ||||| || ||||| | ||| || |||| Sbjct 94744 CTTCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTT 94803 Query 18240 ttAGCCAAAATATCGATGCGAAACTA-CTAGAAAAGAATATACCCTCAACGCACGCGAAC 18298 ||| |||||| || | ||| |||| | | ||||||||| || || || || ||| || Sbjct 94804 TTAACCAAAAAATTGCTGC-AAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAAT 94862 Query 18299 GCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCA-GTATCCATTTTTGTGCCCATTC 18357 || | | | ||| |||| || | | | ||| |||||| ||| |||||| || Sbjct 94863 GCAACAACACGTTCTCCAAATGTGGAAGT-CAGATCATTTATCCAATTTATTGCCCAGTC 94921 Query 18358 TCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCT 18409 ||| | || |||| ||||||| |||||||| || | |||| Sbjct 94922 AGCTTTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAATAATTTATCT 94973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731776335181200