Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2640 167 2e-36 seq1218 158 1e-33 seq852 150 2e-31 seq1332 113 4e-20 seq1105 95.1 1e-14 >seq2640 Length=94256 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| ||||||| || ||||| || || || || || |||||||| | | Sbjct 13377 ATGCAGATCTTTGTTAAAACTCTCACCGGAAAGACCATCACTCTGGAAGTAGAGCCGAGT 13318 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||||| || || ||| || ||||| ||||| || || || || ||||| Sbjct 13317 GACACTATAGAAAACGTCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCAG 13258 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || ||| | || ||| | | | | || ||||||||| Sbjct 13257 CAACGTCTTATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAAC 13198 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||||||| || |||||||| |||||| || | || || Sbjct 13197 ATTCAAAAGGAATCGACTCTGCACTTGGTATTGCGACTGAGAGGTGG 13151 Score = 145 bits (160), Expect = 7e-30 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || || || || || |||||||| | | Sbjct 12693 ATGCAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGAGCCGAGT 12634 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||||| ||||| ||| || |||||||||||||| || ||||| |||||| Sbjct 12633 GACACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAA 12574 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 || | |||| ||||||||||| ||||| || || || || || |||| || || Sbjct 12573 CAGAGGCTGATATTTGCCGGGAAGCAGCTAGAAGA--CG-GACGCACGTTGTCGGACTAC 12517 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || || || || |||||||||||| ||||| | ||||| Sbjct 12516 AATATCCAGAAAGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGAGG 12467 Score = 145 bits (160), Expect = 7e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || |||||||| || || || || ||||| ||| | | Sbjct 13605 ATGCAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAGT 13546 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || ||| ||||| ||||| |||||||| ||||||||||| Sbjct 13545 GACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCAG 13486 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| ||||||| ||||| ||||| |||| ||| | | | | || ||||| ||| Sbjct 13485 CAACGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAAC 13426 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||||| || ||||| || || ||||| Sbjct 13425 ATTCAAAAAGAGTCGACCCTTCATCTGGTG 13396 Score = 143 bits (158), Expect = 2e-29 Identities = 161/212 (76%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || ||||| || || || || | ||||| || ||| Sbjct 12921 ATGCAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGAGCCCAGT 12862 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| ||||| ||||| || ||||||||||| ||||| ||||||||| Sbjct 12861 GACACTATCGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGTATACCACCCGATCAA 12802 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 |||||| ||||||| || || |||||||| || || ||| | || |||||||||| | Sbjct 12801 CAACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCG-CACAC-TGTCAGATTACA 12744 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||| ||||| || ||||| || || ||||| Sbjct 12743 ACATCCAAAAAGAGTCGACCCTTCATCTGGTG 12712 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || || || || ||||| || | | Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | |||||| ||| |||||||||||||||||||| ||||| |||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || ||||| | || ||| | | |||| || |||||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| ||||| || | || || ||||||| || || Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGG 12923 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | |||||| | || ||||| ||||| || | ||||| ||| | | Sbjct 13833 ATGCAGATATTCGTGAAAACGTTGACTGGTAAGACTATCACTTTGGAAGTGGAACCAAGT 13774 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || ||||| ||||||||||| || ||||| || |||||||| Sbjct 13773 GATACGATCGAGAACGTGAAGGCAAAA-ATCCAAGACAAGGAGGGAATTCCACCCGATCA 13715 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| || || || |||| || | | | |||| |||||||| Sbjct 13714 GCAGAGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACTCTGTCCGATTATAA 13655 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || ||||| || | || || || |||| ||||| Sbjct 13654 TATCCAGAAAGAGAGCACACTTCATCTCGTACTGAGACTGCGTGGAGG 13607 >seq1218 Length=332501 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| ||||||| | || || || || ||||| | ||||| || | | Sbjct 113821 ATGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAGT 113880 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||| | |||||| ||||| || || ||||||||||| || || |||||| Sbjct 113881 GATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCAA 113940 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||||||||| || || |||||||| ||| ||| | |||||||||||||| Sbjct 113941 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAAC 114000 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||||||||| || ||||| | | ||||| || || Sbjct 114001 ATTCAGAAAGAATCGACACTTCATTTGGTTCTTAGGTTGCGTGGTGG 114047 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||||||||| | ||||| ||| ||| Sbjct 114049 ATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAGT 114108 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || || || || || ||||||||||| || |||||||| ||| Sbjct 114109 GATACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCAA 114168 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||| |||||||| || ||||| ||||| || | | | | | || ||||| ||| Sbjct 114169 CAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCGGATTACAAC 114228 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||||| || || ||| | || | ||||||| || || Sbjct 114229 ATCCAGAAAGAATCCACGCTTCACCTCGTTCTCAGATTGCGTGGTGG 114275 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | |||||||| ||||| || ||||| || || |||||||| ||| | Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||||| |||||| || || || ||||||||||| || || ||||| ||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| ||||| ||| |||| || | | | || || || || Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || ||||| || || || || | || || | ||||| Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGG 114503 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || |||| || ||||| ||||| || || || || | | Sbjct 113244 ATGCAGATCTTCGTTAAGACATTAACTGGGAAAACAATTACTCTTGAGGTGGAGCCTAGT 113303 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| |||||||| || || ||||| || || |||||||| Sbjct 113304 GATACAATTGAAAATGTGAAAACTAAGATCCAGGATAAGGAAGGTATTCCGCCCGATCAG 113363 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||||| |||||| | | | |||| || || ||| Sbjct 113364 CAGCGTCTCATCTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACCCTGTCTGACTACAAC 113423 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| ||||| || || || || Sbjct 113424 ATTCAGAAGGAGTCTACTCTCCA 113446 >seq852 Length=358492 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || ||| | ||||| || || || ||||| |||||| | ||||| ||| ||| Sbjct 357643 GATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAG 357584 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| || || |||||| |||||||||||||| ||||| |||||||| Sbjct 357583 TGATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCA 357524 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | || || |||||||| || || | || ||| | | | | || |||||||| Sbjct 357523 ACAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAA 357464 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| || || |||||||| | || ||||| || || Sbjct 357463 TATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGG 357416 Score = 145 bits (160), Expect = 7e-30 Identities = 175/237 (74%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 24694 GATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGT 24753 |||||| | |||||||| || ||||||| ||||| || || |||||||| | || || Sbjct 358106 GATTGAAA--ATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGT 358049 Query 24754 AGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACC 24813 ||| | | ||||||| | || | |||||| |||||| |||||||||||||| || || Sbjct 358048 AGAGCCAAGCGACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCC 357989 Query 24814 TCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTC 24873 ||||| ||||| | ||||| || ||||| || || || || || | | |||| Sbjct 357988 GCCCGACCAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTC 357929 Query 24874 AGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||||| || ||||| || || || ||||| | || ||| | ||||| Sbjct 357928 TGATTATAACATTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGG 357872 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| ||||||| || || ||||||||||| || | || || ||| | | | Sbjct 357414 ATGCAAATATTTGTTAAAACCCTGACTGGTAAAACTATAACTTTAGAGGTGGAACCTAGC 357355 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||||| |||||| || |||||||| |||||||| || || || ||||| Sbjct 357354 GATACCATAGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAG 357295 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || || || ||||||| | | | | || |||||||| Sbjct 357294 CAGAGGCTTATTTTTGCAGGAAAGCAATTGGAGGACGGTCGCACCCTTTCTGATTATAAT 357235 Query 24884 ATTCAAAAGGAATCGAC 24900 || ||||||||||| || Sbjct 357234 ATCCAAAAGGAATCCAC 357218 >seq1332 Length=188647 Score = 113 bits (124), Expect = 4e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||||| ||| | |||||| |||||||||||||| ||||| ||||||||| Sbjct 169319 GACACCATAGAAAACGTATAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 169260 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | || || |||||||| || || | || ||| | | | | || |||||||| Sbjct 169259 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 169200 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||| ||||| ||||| |||||||| | || ||| | ||||| Sbjct 169199 ATTAAAAAAGAATCTACACTTCACTTGGTTCTTCGTTTGAGAGGAGG 169153 >seq1105 Length=277015 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 139105 ACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTA 139164 |||||||| || ||| ||||| || ||||| | ||| ||||| || || || || ||| Sbjct 90819 ACTTCGTCTGGTGAGCTATATTCAACTATTTCAGTACATAAATTGCTGCATTTAATTGTA 90760 Query 139165 CCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTG 139224 || | ||||||||||| ||| || ||||| |||||||| || | ||| || || || Sbjct 90759 CCGAGGTTTTGTTGATTAGATTTACGATTACATGCATCTTTATACACCATGTAAGGAGTT 90700 Query 139225 CCAGTTTCCACTTGTGTCTCTATAATG 139251 |||||||| | || | || || |||| Sbjct 90699 CCAGTTTCAATCTGAGACTGTAAAATG 90673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449838792759960