Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2640 105 6e-18 seq1218 100 2e-16 seq852 95.1 1e-14 >seq2640 Length=94256 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || || || ||||| | ||||| || ||||| || | ||| |||||| Sbjct 12922 AATGCAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGAGCCCAG 12863 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || ||| ||| | ||||| |||||| ||||||||||| | || ||||| Sbjct 12862 TGACACTATCGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGTATACCACCCGATCA 12803 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | || || | |||||||||||||| || || | | ||| || | |||||||| Sbjct 12802 ACAACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCGCACACTGTCAGATTACAA 12743 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| |||||||| || || | || ||||| | ||||| || || || Sbjct 12742 CATCCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGACTTCGTGGCGG 12695 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||||||||| || ||||| || || || ||||| || || | ||| ||||| Sbjct 12466 AATGCAAATATTCGTGAAAACATTGACTGGTAAAACAATAACACTGGAAGTCGAGCCGAG 12407 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || |||||| ||||| ||||| | || || || Sbjct 12406 TGACACGATCGAGAACGTCAAGGCGAAGATACAAGACAAGGAAGGTATTCCTCCAGACCA 12347 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || |||||||||| |||||| |||||||| || || | | | || | | |||||||| Sbjct 12346 GCAGAGACTTATTTTTGCGGGAAAACAGCTAGAAGACGGCCGCACGCTTTCAGATTACAA 12287 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 |||||||||||||| || || ||| |||| | | || |||| ||||| Sbjct 12286 TATTCAAAAAGAATCCACCTTACACTTGGTTCTGCGTCTCAGAGGTGGAAA 12236 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || || || | || || || ||||| ||| | ||| |||||| Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | |||||| || || ||||||||||| | || |||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||||||||| ||| || ||||| | || |||| | || || |||| || ||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||| |||||||| || | || | || | ||| |||| || |||| Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGGAA 12921 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||| |||||| | ||||| || ||||| || | ||| ||||| Sbjct 13378 AATGCAGATCTTTGTTAAAACTCTCACCGGAAAGACCATCACTCTGGAAGTAGAGCCGAG 13319 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || ||| | | | || || || || || ||||| ||| | ||| ||||| Sbjct 13318 TGACACTATAGAAAACGTCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCA 13259 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | ||||| | ||| || || ||| | || |||| | || | | ||||| || Sbjct 13258 GCAACGTCTTATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAA 13199 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||| ||||| || ||||| |||| || ||||| |||| || Sbjct 13198 CATTCAAAAGGAATCGACTCTGCACTTGGTATTGCGACTGAGAGGTGG 13151 >seq1218 Length=332501 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||||||||||||||||||| | || |||||||| ||||| | ||| || || Sbjct 114048 AATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAG 114107 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | || || || ||| |||||||||||| | || || || Sbjct 114108 TGATACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCA 114167 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | | || | |||||| ||||| ||||| || | | || | |||||||||| Sbjct 114168 ACAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCGGATTACAA 114227 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| || |||||||| ||| | ||| | || | ||| |||| || || Sbjct 114228 CATCCAGAAAGAATCCACGCTTCACCTCGTTCTCAGATTGCGTGGTGG 114275 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||||||||| | ||||| || || || || | ||| ||||| | Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | |||||| || ||| |||||||||||| | || || ||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||||| || | ||| || || ||| |||| || | | || | | || ||||| Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 ||||| ||||| || || |||| | || | |||||| |||| ||||| Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGGAAA 114506 >seq852 Length=358492 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||| |||||| | || || ||||||||||| | ||| || || Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || |||||| ||||||||||| | || |||||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||| | |||| ||| || || || | || |||| | || | | ||||| || Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 357463 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||||||| | ||| |||| | | ||||||| || Sbjct 357462 ATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGG 357416 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 110264 AGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 ||||| |||||||| || || || |||||| |||| || || || ||||| | || Sbjct 358107 AGATTGAAAATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTA 358048 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 ||||| ||| || ||| | |||||| |||||| |||||||||||| | || Sbjct 358047 GAGCCAAGCGACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCG 357988 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 || ||||| || | |||| || || || || || || || | | || || | Sbjct 357987 CCCGACCAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCT 357928 Query 110444 GATTACAACATTCAAAAAGAATCTAC 110469 ||||| |||||||| ||||||||||| Sbjct 357927 GATTATAACATTCAGAAAGAATCTAC 357902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412788985531301