Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2640 138 7e-28 seq1218 118 7e-22 seq852 91.5 1e-13 >seq2640 Length=94256 Score = 138 bits (152), Expect = 7e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| ||||| |||| |||| ||||| |||| ||| ||||| || || ||||||| Sbjct 12465 TTCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCG 12524 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | | |||| | || || || ||||| ||||| || ||||| | || || ||| | | Sbjct 12525 ACAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAG 12584 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | ||||||| || ||| | |||| | ||| | | ||| | Sbjct 12585 GAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTA 12644 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || |||||||| |||||||| || ||||||||||||||||| Sbjct 12645 CTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 138 bits (152), Expect = 7e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || | | ||| || ||||| |||| ||| ||| || |||||||| || || | Sbjct 13377 TTCCACCACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGG 13436 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| |||| |||| |||| ||| || |||||||||||||| |||||||| || | | Sbjct 13437 AAAGGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAG 13496 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || |||||||| | |||||| ||||| | | || | ||| | | |||| Sbjct 13497 GGATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGA 13556 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || ||||||||||| || || |||||||| Sbjct 13557 CTTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 129 bits (142), Expect = 4e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| ||||||||||| || || ||| | || |||| || | ||||||||||| ||| Sbjct 13187 TCCTTTTGAATGTTATAATCAGAGAGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAG 13246 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || |||||||| || | || | ||||| || || | ||||||| |||||| | Sbjct 13247 ATAAGACGTTGCTGATCAGGGGGAATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTT 13306 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | ||| | | ||| || || | || ||||||||||| ||||| || || ||| Sbjct 13307 TCTATAGTGTCACTCGGCTCTACTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACA 13366 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 13367 AAGATCTGCAT 13377 Score = 113 bits (124), Expect = 3e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | || ||||| || || |||| |||||||| ||||| || ||||| || | Sbjct 13605 TTCCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATCGG 13664 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || ||||| | || |||| ||||||||| || ||||||| || ||||| || | | Sbjct 13665 ACAGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTG 13724 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||||||||| | |||||| || ||| | |||| ||| | | || | Sbjct 13725 GAATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTTCTCGATCGTATCACTTGGTTCCA 13784 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | || | || || ||||| || || | || || || || |||||||| || Sbjct 13785 CTTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCATTAT 13836 Score = 109 bits (120), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || | ||| ||||| || || || | ||| || ||||||||||||||||||| Sbjct 12921 TTCCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCG 12980 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | || |||| || | ||| ||||| || || || |||| || || || | | Sbjct 12981 ACAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAG 13040 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || || ||||| | |||||| ||| || || || || | ||| | | ||| Sbjct 13041 GAATTCCTTCTTTGTCTTGGATTTTTGCTTTTAC--ATTCTCGATGGTATCACTCGGCTC 13098 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| ||||||||||| || || |||||||| || |||||||| Sbjct 13099 CACTTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || || ||||| |||| ||| ||| || || ||||| || || || || |||| | Sbjct 12707 CTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGACCG 12766 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || || || || || ||||||||||| ||||| || || | || | || || ||| Sbjct 12767 TCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTG 12826 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || || | | || | ||| ||| ||| || || | || ||| Sbjct 12827 TCCTGAATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATG 12886 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || || || || || ||||||||||| Sbjct 12887 GTCTTTCCGGTAAGTGTTTTCACGAAGATCTGCAT 12921 >seq1218 Length=332501 Score = 118 bits (130), Expect = 7e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || || || || || | ||| ||||||||| || || ||||| || ||| |||| || Sbjct 113807 CTGAGAACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCA 113748 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || || ||||| || || ||||| || || ||||| || | || | || ||||| Sbjct 113747 TCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTA 113688 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | ||||| ||| || |||||| ||| ||| ||| || || | || ||| Sbjct 113687 TCTTGGATTTTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATG 113628 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||||| |||||||| ||||| |||||||| Sbjct 113627 GTCTTTCCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || | |||||| || |||| |||| || || |||||||||||||| || | Sbjct 114049 TTCCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTG 113990 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | || |||| ||||| ||||| || || |||||||| || || || ||| | | Sbjct 113989 ACAGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTG 113930 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || || || | || || ||| || |||| | ||| | | ||| | Sbjct 113929 GGATTCCTTCTTTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAA 113870 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || | ||| || ||||| |||||||| Sbjct 113869 CTTCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 Score = 96.9 bits (106), Expect = 2e-15 Identities = 142/200 (71%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || ||| | || |||| || || ||||| || || || Sbjct 113435 CTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCGAGCTGCTTGCCTGCAAA 113376 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||| || |||| | || ||||| || | || || ||| || Sbjct 113375 GATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGGATCTTAGTTTTCACATT 113316 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| | | ||| || |||| || || || || || || | ||||| || Sbjct 113315 TTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTCCCAGTTAATGTCTTAAC 113256 Query 34966 AAAGATCTGCATGAT-AGTG 34984 |||||||||||||| |||| Sbjct 113255 GAAGATCTGCATGATGAGTG 113236 >seq852 Length=358492 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| ||||| | || |||| |||| ||| || |||||||||||||| || | Sbjct 357870 TTCCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAG 357929 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | | |||| | || || ||||||||||||||||| |||| | || ||||| ||| Sbjct 357930 ACAAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCG 357989 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || || ||||| | || ||| ||| || || || || | || | | ||| Sbjct 357990 GAATGCCTTCTTTGTCTTGAATCTTTGCTTTTAC--ATTCTCGATTGTGTCGCTTGGCTC 358047 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || ||||| || || || || || || || |||||||| Sbjct 358048 TACCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCAT 358098 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || || || ||||| ||||| || |||| | |||| |||| Sbjct 357431 AGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGATAAGGTGCGACCATCT 357490 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | |||||||||||| || || | || || || || |||| | || || ||||| Sbjct 357491 TCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCT 357550 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | |||| | ||| ||| || || || | || ||||| Sbjct 357551 TGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACTTCCAACGTAATGGTT 357610 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || || ||||| || ||||| Sbjct 357611 TTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325651292182883