Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1218 102 7e-17 seq852 98.7 8e-16 seq2640 93.3 3e-14 >seq1218 Length=332501 Score = 102 bits (112), Expect = 7e-17 Identities = 171/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||| ||||| || || ||||| ||||||||| | ||| ||| | | Sbjct 113820 AATGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAG 113879 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | |||||| |||||| ||||||||||| | || ||||| Sbjct 113880 TGATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCA 113939 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | || || | ||| || || |||||||| || | | ||| || | || || || Sbjct 113940 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAA 113999 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAA 107794 |||||| || || || || | || |||| | || ||||| || || ||| ||| Sbjct 114000 CATTCAGAAAGAATCGACACTTCATTTGGTTCTTAGGTTGCGTGGTGG----AATGCAAA 114055 Query 107795 TATTTGT 107801 ||||||| Sbjct 114056 TATTTGT 114062 >seq852 Length=358492 Score = 98.7 bits (108), Expect = 8e-16 Identities = 170/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| ||||| || || || ||||| || ||||||||||| | || || | | Sbjct 357871 AATGCAGATTTTCGTGAAGACATTAACTGGAAAAACCATTACTTTGGAGGTAGAACCAAG 357812 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||||| ||| | ||||| || || ||||| ||||| | || || || Sbjct 357811 CGATACTATCGAAAACGTAAAGGCCAAAATCCAGGATAAGGAAGGAATCCCGCCTGACCA 357752 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | | |||| ||| ||||||||| | ||||||| || || | || ||||| Sbjct 357751 GCAGCGCTTGATTTTTGCCGGTAAACAGTTAGAGGACGGTCGCACTTTGTCAGATTACAA 357692 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAA 107794 ||| || ||||| |||||| | || ||||| | |||||||| || || || ||| Sbjct 357691 CATCCAGAAGGAATCTACGCTCCATTTGGTGCTTAGATTGCGTGGTGG----GATGCAAA 357636 Query 107795 TATTTGT 107801 ||||||| Sbjct 357635 TATTTGT 357629 >seq2640 Length=94256 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| ||||| | || || || ||||| || | ||| ||| | | Sbjct 12693 ATGCAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGAGCCGAGT 12634 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | ||||| ||| || || ||||||||| | || ||||| Sbjct 12633 GACACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAA 12574 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || ||||| || |||| || || |||||||||| Sbjct 12573 CAGAGGCTGATATTTGCCGGGAAGCAGCTAGAAGACGGACGCACGTTGTCGGACTACAAT 12514 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || || || ||||| || | ||| |||||||||||||| |||| |||| Sbjct 12513 ATCCAGAAAGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGAGGAA 12465 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || || || | || || || ||||| ||| | ||| |||| | | Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | |||||| ||| || || |||||||| | || ||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| ||| || ||||| | || || | || || ||||||| ||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||| || || || || | || | || |||||||||| || |||| Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGGAA 12921 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| || || ||||| || || || ||||| || || | ||| ||| | | Sbjct 12466 AATGCAAATATTCGTGAAAACATTGACTGGTAAAACAATAACACTGGAAGTCGAGCCGAG 12407 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | || || ||||| || || ||||| | || || || Sbjct 12406 TGACACGATCGAGAACGTCAAGGCGAAGATACAAGACAAGGAAGGTATTCCTCCAGACCA 12347 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||||||||||| |||||| |||||||| || |||| | || | | || ||||| Sbjct 12346 GCAGAGACTTATTTTTGCGGGAAAACAGCTAGAAGACGGCCGCACGCTTTCAGATTACAA 12287 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAAT 107786 |||||||| || || || || ||| |||| || | | |||| |||||| Sbjct 12286 TATTCAAAAAGAATCCACCTTACACTTGGTTCTGCGTCTCAGAGGTGGAAAT 12235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398825965270873