Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq852 147 3e-30 seq1218 127 3e-24 seq2640 125 1e-23 seq1332 102 1e-16 seq381 86.0 1e-11 >seq852 Length=358492 Score = 147 bits (162), Expect = 3e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| | || || ||||| || ||| | || || |||| || || Sbjct 357413 TGCAAATATTTGTTAAAACCCTGACTGGTAAAACTATAACTTTAGAGGTGGAACCTAGCG 357354 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| |||||| ||| ||||||||| |||||||| ||||| | Sbjct 357353 ATACCATAGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAGC 357294 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || ||||||||||| || ||||| || || | | || | | |||||||||| Sbjct 357293 AGAGGCTTATTTTTGCAGGAAAGCAATTGGAGGACGGTCGCACCCTTTCTGATTATAATA 357234 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||| ||||| ||| | ||| | ||| Sbjct 357233 TCCAAAAGGAATCCACTTTGCATCTGGTA 357205 Score = 141 bits (156), Expect = 1e-28 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| | || |||||||| ||||| | || || |||| | | Sbjct 357641 TGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGTG 357582 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| || || || || ||| |||||||| || || |||||||||| Sbjct 357581 ATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAAC 357522 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | |||||||| || || |||||||| ||| | | || ||| | |||||||||| Sbjct 357521 AGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAATA 357462 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||||||||| || | || || ||| | || || |||| |||| ||||||| Sbjct 357461 TTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGGTATGCAAATATT 357404 Score = 114 bits (126), Expect = 2e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| |||| || || || |||||| | || ||||| | | || Sbjct 358097 TGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTAGAGCCAAGCG 358038 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||||||| || || ||| |||||||||||||| ||||| |||| Sbjct 358037 ACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCGCCCGACCAAC 357978 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | ||||| || || || ||| | || || | | || || | |||||||| | Sbjct 357977 AGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCTGATTATAACA 357918 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| || | ||||| || | || || |||||||| Sbjct 357917 TTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGG 357872 >seq1218 Length=332501 Score = 127 bits (140), Expect = 3e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| | || ||||| || || || | || ||||| | | || Sbjct 114278 TGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGCG 114337 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||||||| |||||| || |||||||||||||| ||||| |||| Sbjct 114338 ACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAAC 114397 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || |||||||| || || || || || | | || | | || || |||| Sbjct 114398 AGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAATA 114457 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAA 146264 | || ||||| ||||| | |||||||| | || | |||||||| || ||| Sbjct 114458 TTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGGAAATTAA 114510 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || |||||||| || |||||||||||| |||| || || | || | Sbjct 113245 TGCAGATCTTCGTTAAGACATTAACTGGGAAAACAATTACTCTTGAGGTGGAGCCTAGTG 113304 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| |||| ||| || || ||| ||||| ||||| |||||||| | Sbjct 113305 ATACAATTGAAAATGTGAAAACTAAGATCCAGGATAAGGAAGGTATTCCGCCCGATCAGC 113364 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||| |||||||| || || | || ||| | | || | | || || || | Sbjct 113365 AGCGTCTCATCTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACCCTGTCTGACTACAACA 113424 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || || || || ||| ||||| Sbjct 113425 TTCAGAAGGAGTCTACTCTCCAT 113447 Score = 105 bits (116), Expect = 1e-17 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| | || || ||||| |||||| | || || |||| | | Sbjct 114050 TGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAGTG 114109 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| || |||||| || |||||||||||||| ||||| |||| Sbjct 114110 ATACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCAAC 114169 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| || |||||| | || || | || || | ||||| || | Sbjct 114170 AACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCGGATTACAACA 114229 Query 146212 TACAAAAAGAATCGAC 146227 | || |||||||| || Sbjct 114230 TCCAGAAAGAATCCAC 114245 Score = 100 bits (110), Expect = 4e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | ||||| || || || || || ||||| | || || || | | | Sbjct 113822 TGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAGTG 113881 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| | ||||||||| || || || ||||||||| || ||||| ||||||| Sbjct 113882 ATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCAAC 113941 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| || || || | || ||| |||| | |||||||||| | Sbjct 113942 AGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAACA 114001 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || ||||||||||| | ||||| || Sbjct 114002 TTCAGAAAGAATCGACACTTCATTTGGT 114029 >seq2640 Length=94256 Score = 125 bits (138), Expect = 1e-23 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| |||| ||| | || ||||| || || || | || || || | | | Sbjct 13148 TGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGTG 13089 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||||||| ||||| ||| |||||||| ||||| || ||||||| Sbjct 13088 ATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAAC 13029 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| |||||||| || ||||||||||| ||| | | || | | || ||||| | Sbjct 13028 AGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAACA 12969 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATT 146248 | || |||||||| || ||||| ||||| | |||| Sbjct 12968 TTCAGAAAGAATCCACACTCCATCTAGTACTGAGATT 12932 Score = 114 bits (126), Expect = 2e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || |||||||| | || || || || || ||| | || ||||| | | | Sbjct 12692 TGCAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGAGCCGAGTG 12633 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| |||| ||||| ||||||||| |||||||||||||| || ||||||| Sbjct 12632 ACACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAAC 12573 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || ||||| || || || |||| || | ||||| | || || |||| Sbjct 12572 AGAGGCTGATATTTGCCGGGAAGCAGCTAGAAGACGGACGCACGTTGTCGGACTACAATA 12513 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | || ||||| || || | || || || || |||| |||||||| | ||||||| Sbjct 12512 TCCAGAAAGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGAGGAATGCAAATATT 12455 Score = 105 bits (116), Expect = 1e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | |||||||| || || |||||||| || | || || || | | | Sbjct 12464 TGCAAATATTCGTGAAAACATTGACTGGTAAAACAATAACACTGGAAGTCGAGCCGAGTG 12405 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || || || |||||| || ||||| ||||| || || || | Sbjct 12404 ACACGATCGAGAACGTCAAGGCGAAGATACAAGACAAGGAAGGTATTCCTCCAGACCAGC 12345 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| |||||||| || ||||| |||| || | ||| | ||||||| |||| Sbjct 12344 AGAGACTTATTTTTGCGGGAAAACAGCTAGAAGACGGCCGCACGCTTTCAGATTACAATA 12285 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAA 146264 | ||||||||||| || | || || || | || | ||||| || || ||| Sbjct 12284 TTCAAAAAGAATCCACCTTACACTTGGTTCTGCGTCTCAGAGGTGGAAATTAA 12232 Score = 105 bits (116), Expect = 1e-17 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | |||||| | || ||||| || || ||| | || || || | | | Sbjct 12920 TGCAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGAGCCCAGTG 12861 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| |||||||||| ||| || || |||||||| || ||||||||||||| Sbjct 12860 ACACTATCGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGTATACCACCCGATCAAC 12801 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || || || |||||||| |||| || | | || | ||||||| || | Sbjct 12800 AACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCGCACACTGTCAGATTACAACA 12741 Query 146212 TACAAAAAGAATCGAC 146227 | |||||||| ||||| Sbjct 12740 TCCAAAAAGAGTCGAC 12725 >seq1332 Length=188647 Score = 102 bits (112), Expect = 1e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 |||||||| || || ||||||||||| ||| | |||||||| || || |||||||| ||| Sbjct 169283 AAAGAAGGTATACCGCCCGATCAACAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGAT 169224 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | | || ||| | ||||||||||| |||||||||| || | || || || | || Sbjct 169223 GGTCGCACCTTATCCGATTATAATATTAAAAAAGAATCTACACTTCACTTGGTTCTTCGT 169164 Query 146247 TTAAGAGGAGG 146257 || |||||||| Sbjct 169163 TTGAGAGGAGG 169153 >seq381 Length=560238 Score = 86.0 bits (94), Expect = 1e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||| || || || ||||| ||| | | |||||||| || ||||||||||| ||| | Sbjct 529323 AGGTATCCCTCCTGATCAGCAACGTTTAATTTTTGCTGGAAAACAATTAGAAGATGGACG 529264 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 || || | |||||||| || ||||| ||||| ||| | ||| | || ||| ||||||| Sbjct 529263 TACATTGTCTGATTATAACATTCAAAAGGAATCCACTTTACATCTTGTTTTAAGATTAAG 529204 Query 146252 AGGAGGT 146258 ||| ||| Sbjct 529203 AGGTGGT 529197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786063638224440