Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq852 174 1e-38 seq2640 154 1e-32 seq1218 147 2e-30 seq1332 129 5e-25 seq926 96.9 3e-15 >seq852 Length=358492 Score = 174 bits (192), Expect = 1e-38 Identities = 181/235 (77%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||||||| || ||||||||||| || |||||||| |||||||||||||| | Sbjct 357871 TCCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGA 357930 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| || |||||||| || || || | ||||| || || || || ||||| Sbjct 357931 CAAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGG 357990 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || ||||||||||| ||| |||| ||| ||| | || | ||||| | |||| Sbjct 357991 AATGCCTTCTTTGTCTTG-AATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTA 358049 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAA 29792 | || | ||| ||||| || ||||||| |||||||| || ||||||||||| || Sbjct 358050 CCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCATTTTCAA 358104 Score = 165 bits (182), Expect = 6e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | |||||| || ||||| |||||||| |||||||||||||| |||||||| | Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || | ||| || || ||| | || ||||| || ||||| ||||| Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||||||||| ||| |||| ||||| |||||| || ||| |||| || Sbjct 357536 ATACCTTCTTTGTCTTG-AATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAAC 357594 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || || ||||| ||||| | ||||| |||||||| ||||| Sbjct 357595 TTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 150 bits (166), Expect = 1e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| | |||||||| ||||| || |||||||| | || ||||||| Sbjct 357199 ACGAAGTACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCAGAAAGGGTGCGACC 357258 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | ||| || || ||| | || | || |||||||| || |||||||| ||||| Sbjct 357259 GTCCTCCAATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGTGGAATACCTTCTTT 357318 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||| ||| ||| |||||| || || | |||| || || | |||||| Sbjct 357319 ATCTTGGATTTTAGCTTTTACATTTTCTATGGTATCGCTAGGTTCCACCTCTAAAGTTAT 357378 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| ||||| | ||||||||||||||| ||||| Sbjct 357379 AGTTTTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||||||| ||||| ||||| || || ||||| ||||| | | |||||| || Sbjct 357659 AGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGTGCGACCGTCC 357718 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||||| || ||| | ||||| | ||||| || ||||| || || || || || Sbjct 357719 TCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCTTCCTTATCC 357778 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| || || |||| | ||| || ||||||| || | ||| || ||| Sbjct 357779 TGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAATGGTT 357838 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || |||||||| || || || || ||||||||| Sbjct 357839 TTTCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 >seq2640 Length=94256 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| |||| ||||| || || || ||||| ||||||||||||||||| | Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAG 13210 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| || | || || || ||| | || | | ||||||||| || ||| Sbjct 13211 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGA 13270 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||| ||||||| |||| ||||| |||||| ||||||| | |||||| Sbjct 13271 ATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACT 13330 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| || || || || || | ||||||||||| ||||||||| Sbjct 13331 TCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCATT 13378 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| ||||| | || |||||| ||||| ||||| ||||| || || || || |||| Sbjct 12466 TCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGA 12525 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| || || || || || || ||| |||||| || || ||||| || || Sbjct 12526 CAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGG 12585 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| || ||||||||||||| |||| || || |||||| ||||||| | ||||| Sbjct 12586 AATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTAC 12645 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||| || || || || || | ||||| ||||| |||||||| Sbjct 12646 TTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 138 bits (152), Expect = 9e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || | |||||| ||||| || | ||||||||||||||||| || ||||| | Sbjct 12238 TCCACCTCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGA 12297 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||||| || || || ||||| || ||| | || | ||| ||||| || || || Sbjct 12298 AAGCGTGCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGG 12357 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||| || |||||||||| || ||||| | || | |||||| | || || Sbjct 12358 AATACCTTCCTTGTCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGAC 12417 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| || ||||| ||||| ||||| || ||||| || ||||| |||||| Sbjct 12418 TTCCAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCATT 12466 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| |||||| || || |||||||||||||| ||||| | || ||||||| ||| Sbjct 13394 AGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCT 13453 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||| || || | |||| | ||||||||| || || || || || ||||| Sbjct 13454 TCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCC 13513 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | |||| |||||| |||| | |||||| |||| ||||| || || || || Sbjct 13514 TGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATGGTC 13573 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || | ||| || || || ||||||||| Sbjct 13574 TTACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | || | ||| || | |||||| ||| ||||| || || |||||||| | Sbjct 13606 TCCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGA 13665 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| || || | ||| || |||||| | |||||||| |||||||| || || Sbjct 13666 CAGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTGG 13725 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| ||||| |||||||| | |||| || || | || | || ||| |||| || Sbjct 13726 AATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTTCTCGATCGTATCACTTGGTTCCAC 13785 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| | ||| ||||| || ||||| || ||||| || |||||||||||| Sbjct 13786 TTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCATT 13834 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | ||| | ||| || | ||| || ||||||||||| ||||||||||| |||| Sbjct 12922 TCCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGA 12981 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || ||| ||| || | |||||| |||||| | || | ||| || ||||| || || Sbjct 12982 CAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGG 13041 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| || ||||||||||| | |||| ||| ||| | || | || ||| | || || Sbjct 13042 AATTCCTTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGCTCCAC 13101 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || || || ||||| | || || || || |||||||| Sbjct 13102 TTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 >seq1218 Length=332501 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | ||| | || ||||||||||| || |||||||| |||||||||||||| | Sbjct 114048 TCCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGA 113989 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||| || ||| || || || ||||||||| | |||| | || ||||| || || Sbjct 113988 CAGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGG 113929 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || ||||| || || ||| || | ||| ||| | |||| ||| ||| | || | Sbjct 113928 GATTCCTTCTTTATCCTG-AATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAA 113870 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | || || || |||||||| |||||||||||||||||||||||| Sbjct 113869 CTTCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCATT 113820 Score = 141 bits (156), Expect = 7e-29 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||||||||||||||| || ||||| ||||||| | |||||| || || |||||| Sbjct 114251 TGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCCAGTTGT 114192 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| | || || | ||| || || || ||||| || |||||||| || |||||| Sbjct 114191 TTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTG-AATTTT 114133 Query 29704 TGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | || ||| |||| | || ||| |||| ||||| | ||| |||||||||||||| Sbjct 114132 AGCCTTAACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAGT 114073 Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787 | ||||| |||||||| |||||| Sbjct 114072 CAGAGTTTTGACAAATATTTGCATT 114048 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | ||| || || || || || |||||||| || || | | ||| ||| ||| Sbjct 113455 AGAACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCC 113396 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || ||||| ||| | || | | |||||||| ||||||||||| || || || Sbjct 113395 TCGAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCC 113336 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||| ||| |||| | || ||| | | || || |||||||| || ||| Sbjct 113335 TGGATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTT 113276 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || ||||| || |||||||| Sbjct 113275 TTCCCAGTTAATGTCTTAACGAAGATCTGCAT 113244 >seq1332 Length=188647 Score = 129 bits (142), Expect = 5e-25 Identities = 132/170 (78%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||||||| || ||||| ||||| || |||||||||| ||| |||||||| | Sbjct 169152 TCCTCCTCTCAAACGAAGAACCAAGTGAAGTGTAGATTCTTTTTTAATATTATAATCGGA 169211 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||||| ||| || | ||| || || ||| | || ||||| || ||||| ||||| Sbjct 169212 TAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGG 169271 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCA 29727 ||||| ||||||||||| ||| |||| | || |||||| |||||| Sbjct 169272 TATACCTTCTTTGTCTTG-AATCTTTGCCTATACGTTTTCTATGGTGTCA 169320 >seq926 Length=287075 Score = 96.9 bits (106), Expect = 3e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||| ||||| ||||||| ||| || ||| |||||| || || ||| | || || Sbjct 189804 AATACCTTCTTTATCTTGTATTTTGGCCTTCACATTTTCTATTGTATCTGAAGGCTCAAC 189863 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| | ||| ||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct 189864 TTCCAAAGTGATAGTCTTGCCAGTTAATGTTTTTACAAAAATCTGCATTTT 189914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385170105859437