Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1218 118 1e-21 seq2640 114 1e-20 seq852 114 1e-20 >seq1218 Length=332501 Score = 118 bits (130), Expect = 1e-21 Identities = 153/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| |||||||| || || ||| | | | ||||| |||| Sbjct 113796 ATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCA-TCCTCAAGCT 113738 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||||||||| | ||||| |||||||| || || || || |||||||| || ||| | Sbjct 113737 GCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGGAT-T 113679 Query 133576 TTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || |||| | | ||| | |||||| ||||||| || || | |||| ||| || || Sbjct 113678 TTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATGGTCTTTCCC 113619 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || ||||||||||| Sbjct 113618 GTCAGGGTCTTCACAAAAATCTGCAT 113593 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || || || ||| | ||||||||||||||||| Sbjct 113440 GTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCA-TCCTCGAGCTGCTTGCC 113382 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| |||||||| ||||| || || |||||||| || |||||| || Sbjct 113381 TGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGGATCTTAGTTTT 113322 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| || || | |||||||| || | || | ||||| || || | || Sbjct 113321 CACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTCCCAGTTAATGT 113262 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 113261 CTTAACGAAGATCTGCATG 113243 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||| ||||||||||| |||||||| ||| | | | |||| ||| || | Sbjct 114482 AAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCG--GAAAGAGTACGACCGTCTTCCA 114425 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||| || || | || || | ||| |||||||| || |||||||| ||||| ||| Sbjct 114424 ACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTC-CTGA 114366 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || || | | || | |||||| ||||||| || || | || | || || Sbjct 114365 ATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTACTTCCAGTGTTATAGTCTTT 114306 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || ||||| || || || ||||| Sbjct 114305 CCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| |||||||| || |||||||| | ||| | ||| || || || || ||| Sbjct 114245 GTGGATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCCAGTTGTTTTCCC 114186 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || | || || ||||||||||| |||||||| ||||| ||| ||| || | Sbjct 114185 GCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCC-TGAATTTTAGCCTT 114127 Query 133584 AGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | | |||| || || |||| || || || | || | |||||||| |||||||| Sbjct 114126 AACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAGTCAGAGT 114067 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || || || ||||| Sbjct 114066 TTTGACAAATATTTGCAT 114049 >seq2640 Length=94256 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || |||| |||||| ||||| || ||||||||||| | |||| ||| || ||| Sbjct 12260 AAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGAAAGCGTGCGGCCGTCTTCTAGC 12319 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || ||||| |||| || | ||||||||| ||||| || ||||||||||| ||| Sbjct 12320 TGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGTATC 12379 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | ||| | |||||| | ||||| || || | || | ||||| || Sbjct 12380 TTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGACTTCCAGTGTTATTGTTTTACCA 12439 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| ||||| || ||||| Sbjct 12440 GTCAATGTTTTCACGAATATTTGCAT 12465 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| |||||||| || || ||||||||| | ||| ||| | || || | | Sbjct 13402 ATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCA-TCTTCCAATT 13460 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || ||| | || || || ||||| ||||||||||| ||||||||||| ||| | Sbjct 13461 GTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGGATTT 13520 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||||| | || | ||||| | || || || || | ||||| ||| || |||| Sbjct 13521 TTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATGGTCTTACCGG 13580 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || |||||||||||||| Sbjct 13581 TGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| |||||||| || || |||| ||| || ||| Sbjct 12488 AAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGACAACGTGCGTCCGTCTTCTAGC 12547 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || |||| ||| || || ||||| |||||||| ||||| || Sbjct 12548 TGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGTATT 12607 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||| | | || | ||||| | ||||| || || | |||| ||| || || Sbjct 12608 TTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACTTCTAGAGTGATGGTCTTCCCC 12667 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || |||||||| || |||||||| Sbjct 12668 GTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || || || || || || ||| | || || | || || || Sbjct 12953 GTGGATTCTTTCTGAATGTTATAGTCCGACAGAGTACGACCA-TCTTCTAATTGTTTTCC 13011 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || | ||| || || ||||| || ||||| ||||| ||| |||||||| Sbjct 13012 AGCAAAAATAAGTCTCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGGAT-TTTTGCTT 13070 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | ||| | || || | |||||||| || | ||||| ||| || || ||||| | Sbjct 13071 TTACATTCTCGATGGTATCACTCGGCTCCACTTCCAGGGTGATGGTCTTTCCAGTCAGTG 13130 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||||||||||||||| Sbjct 13131 TCTTTACGAAAATCTGCAT 13149 >seq852 Length=358492 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || |||||||| || || ||||| || ||| ||| ||| ||||| Sbjct 357893 AAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGACAAAGTGCGACC-GTCTTCGAG 357951 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || ||| |||| | || ||| |||||||| || |||||||| ||||| || Sbjct 357952 TTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCTTGAAT 358011 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| || | | ||| | |||||| | ||||| || || | || | || || || Sbjct 358012 CTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTACCTCCAAAGTAATAGTCTTCCC 358071 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| |||||||||||||| Sbjct 358072 AGTTAGAGTTTTAACGAAAATCTGCAT 358098 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || || || ||||| || |||||||| || ||| ||| |||||| | Sbjct 357665 AAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGTGCGACC-GTCCTCTAA 357723 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || |||| | ||||||||||| || ||||| |||||||| || ||| Sbjct 357724 CTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCTTCCTTATCCTGGAT 357783 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | || | || ||| | || || || || | || | |||||| || Sbjct 357784 TTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAATGGTTTTTCC 357843 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || | || || |||||||||||||| Sbjct 357844 AGTTAATGTCTTCACGAAAATCTGCAT 357870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483357610858680