Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1105 127 5e-24 seq1500 100 7e-16 seq113 93.3 1e-13 >seq1105 Length=277015 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 |||||||| ||||| ||||| |||||| ||||||| |||||||| | || | ||| Sbjct 85698 TTTGCTATATATCTGGAACCGTGGCATGCAGATATTTTTGAATTTCTTGATTTAAAAAAA 85757 Query 110817 AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876 ||| ||| |||||| | || |||||||||||||||||| | |||||| | ||| Sbjct 85758 AATACCGGAAAGGAAGAATGTCGTGCTCGTGATTTATTTTATGCACTTTGGATTCCCGAT 85817 Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936 ||||| ||| || | ||| ||| ||| |||||||| | |||||||||||| | | Sbjct 85818 TTATTTATGCAAAGAGTTGAAGCTGATGATATGTGGTCGTTGATGTGTCCTCATGAATGT 85877 Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGA 110974 |||| ||| ||| | || ||||| |||||||| Sbjct 85878 TCTGGATTATTTGACAGTTGGGGTAAAGAATTTGAAGA 85915 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 113017 CACCAATGCCTACAGCTTCGACTGCACAGATTCTCGGTAATAATGAATGTTTCGAGCCAA 113076 |||||||||| || ||||| |||||||| ||||| ||||||||||||| | || || Sbjct 100827 CACCAATGCCCACTGCTTCTACTGCACAAATTCTTGGTAATAATGAATCGATAGAACCTT 100886 Query 113077 TTACAAGTAATATTTATGTCCGACGTGTTCTAGCAGGTGAGTTT 113120 ||||||||||||||||| || | ||| || | || || ||| Sbjct 100887 ACACAAGTAATATTTATGTAAGAAGAGTTTTATCGGGGGAATTT 100930 >seq1500 Length=292004 Score = 100 bits (110), Expect = 7e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 304938 AGGCATCTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAG-GTAAA 304996 ||||| |||| ||| || | || ||||| |||| |||||| ||| ||| ||||| Sbjct 66500 AGGCAATGCAAAAATCAGGACGTCCATTAAAATCAATTAAGCAACG-ATTGAAGAGTAAA 66442 Query 304997 GAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTA 305056 || || | || |||| ||| |||||||||||||||| |||||| ||| |||| || Sbjct 66441 GAAGGAAGAATCAGAGGAAATTTAATGGGAAAACGTGTAGATTTTTCTGCTAGAACAGTT 66382 Query 305057 ATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTA 305116 || || ||||| || | | || || ||||| |||||||||||| ||| || Sbjct 66381 ATTACTCCTGACCCTAATTTAAGAATTGATGAAGTAGGAGTTCCAAGATCAATAGCACAG 66322 Query 305117 AAACTAACATTTCCAGAGA 305135 || |||| |||||||||| Sbjct 66321 AATTTAACGTTTCCAGAGA 66303 >seq113 Length=768838 Score = 93.3 bits (102), Expect = 1e-13 Identities = 79/95 (83%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 167248 CACCAGCATTATCGAATTCATTCGCA-TAATTTGGTGCTGAAAATACAGTAACTAATTTA 167306 ||||||||||||| ||||| | | || ||||||||||| ||||||| ||| ||||| | Sbjct 631181 CACCAGCATTATCAAATTC-TCCACAATAATTTGGTGCAGAAAATAGAGTTACTAACTGT 631123 Query 167307 CGATTGAAAAATAATTCATAACCATCTTCAACAAC 167341 || ||| ||| |||||||| |||||||||||||| Sbjct 631122 CGTTTGGCAAAAAATTCATATCCATCTTCAACAAC 631088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186653790450177