Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2640 123 2e-23 seq852 122 6e-23 seq1218 100 2e-16 seq381 100 2e-16 seq1332 98.7 7e-16 >seq2640 Length=94256 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||||||||||| || || || |||||||| || ||||| |||| |||||||| Sbjct 13630 ATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGACAGAGTGCGCCCGTCTTCCAATTG 13689 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||||| ||||| ||||| | ||||||||| | || | || || ||||| ||||| Sbjct 13690 CTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTGGAATTCCCTCCTTGTCTTGGATTTT 13749 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || | || | || | || || |||| |||||| || | ||||| || ||||| | Sbjct 13750 -TGCCTTCACGTTCTCGATCGTATCACTTGGTTCCACTTCCAAAGTGATAGTCTTACCAG 13808 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | |||||||| || || |||||||| Sbjct 13809 TCAACGTTTTCACGAATATCTGCAT 13833 Score = 116 bits (128), Expect = 2e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || || ||||||||| |||||||||||||| || ||||| | || || Sbjct 13396 CACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCTTC 13455 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 ||||||||| ||||| || |||| ||| |||||||| | || | ||||| ||||| Sbjct 13456 CAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTG 13515 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||||| || | |||| || | ||||| || | ||| || || | ||||| || | Sbjct 13516 GATTTT-TGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATGGTCT 13574 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || | || || || || |||||||| Sbjct 13575 TACCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||||||| | |||||||| || || ||| |||||| || || ||||| || || Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | |||||| |||| || | || || |||||||| |||| | ||| |||||| | || Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| || | || | || | ||||| || | || || Sbjct 12587 ATGCCTTCTTTGTCTTGTATTTT-TGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTAC 12645 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | ||||||||||||||||||||| Sbjct 12646 TTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCATA 12694 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || || ||||||||| ||||||||||| || |||||||| |||| || Sbjct 12712 CACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGACCGTCTTC 12771 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | ||||| || || || |||| ||| || ||||| | || | |||||||||||| Sbjct 12772 TAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTGTCCTG 12831 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| || | | |||| || | ||||| || | ||||| || | ||||| || | Sbjct 12832 AATCTT-AGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATGGTCT 12890 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||||| || ||||||||||| Sbjct 12891 TTCCGGTAAGTGTTTTCACGAAGATCTGCAT 12921 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| || || ||||| || ||||| || ||||| ||||| ||||| || Sbjct 13150 ACCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGA 13209 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || || || ||||||||||| || | ||| |||||||| | || Sbjct 13210 GAGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGG 13269 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || ||||| || ||||| || | || | || | ||||| || | || | Sbjct 13270 AATGCCCTCTTTATCTTGTATTTT-TGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTA 13328 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | ||||| |||||||||||||| Sbjct 13329 CTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | ||| | | || | ||| || ||| ||||| || ||||| || || || Sbjct 12923 CCACCACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGAC 12982 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || ||||||||||| |||||||| | | ||| ||||| | || Sbjct 12983 AGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGA 13042 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| || || |||| || | ||| || || | ||||| Sbjct 13043 ATTCCTTCTTTGTCTTGGATTTT-TGCTTTTACATTCTCGATGGTATCACTCGGCTCCAC 13101 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || ||||| || ||||||||| Sbjct 13102 TTCCAGGGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCATA 13150 >seq852 Length=358492 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| |||||| | ||||| || || || |||||||| || || |||||||| Sbjct 357415 ACCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGA 357474 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| | || || ||||| |||||||||||||| || | ||| ||||| |||| Sbjct 357475 TAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGG 357534 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| ||| || || | || | || | ||| || || | ||| | Sbjct 357535 TATACCTTCTTTGTCTTGAATCTT-TGCCTTGACGTTTTCTATGGTATCACTGGGTTCAA 357593 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||| || ||||| || || | ||||| ||||| || ||||| Sbjct 357594 CTTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 122 bits (134), Expect = 6e-23 Identities = 173/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || ||||||||||| | |||||||| || || ||||| || ||| Sbjct 357860 AAAATCTGCATTCCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATG 357919 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || ||||| || | ||||| |||| || | ||| |||||||| |||||||| | ||| Sbjct 357920 TTATAATCAGACAAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGT 357979 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || |||| | ||||||||||| ||| || || || |||| || | ||||| Sbjct 357980 TGGTCGGGCGGAATGCCTTCTTTGTCTTGAATCTT-TGCTTTTACATTCTCGATTGTGTC 358038 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| || || || | || || || || || |||| ||||| || || |||||||| Sbjct 358039 GCTTGGCTCTACCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCAT 358098 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | ||| | | ||||||||| || || || || || ||||||||||| || Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| || || ||||| |||||||||||||| |||||||| || |||| Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || ||||| | | || | || | || ||||||| ||| || Sbjct 357764 ATTCCTTCCTTATCCTGGATTTT-GGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTAC 357822 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || ||||| || ||||| || || || || |||||||| Sbjct 357823 CTCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCAT 357870 >seq1218 Length=332501 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || ||||||||||| || || ||||| |||| |||| ||||||||| ||||| Sbjct 114239 TCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCAAAG 114180 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || ||||| || || || | || | ||||||||||| |||||| | | ||||| Sbjct 114179 ATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATTTT-AGCCTTAACATT 114121 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | || || || | ||| || || | || || ||||| || || | ||||| || Sbjct 114120 TTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTGAC 114061 Query 33738 AAAGATCTGCAT 33749 ||| || ||||| Sbjct 114060 AAATATTTGCAT 114049 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||| | | || ||||| || || |||||| || || ||||| ||||| Sbjct 114503 CCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAA 114444 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| ||||| || || || ||||| |||| | ||| || || |||| Sbjct 114443 AGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGA 114384 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| |||||| | || |||| || | |||||||| | || || Sbjct 114383 ATGCCTTCTTTGTCCTGAATTTT-AGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTAC 114325 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || || || || || | |||||| ||||| || |||||| Sbjct 114324 TTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCATA 114276 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| ||||| ||| || || |||||||| || || || || || | || || | || Sbjct 113447 ATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCGAGCTG 113388 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || || ||||| || | |||||||||||| |||| | |||||| || || || || Sbjct 113387 CTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGGATCTT 113328 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 |||| |||| || | || || || | ||||| |||| || || ||||| || | Sbjct 113327 -AGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTCCCAG 113269 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || ||||||||||| Sbjct 113268 TTAATGTCTTAACGAAGATCTGCAT 113244 >seq381 Length=560238 Score = 100 bits (110), Expect = 2e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| || | ||| || | ||||| |||| || ||||| ||||| ||||| | Sbjct 529196 CACCACCTCTTAATCTTAAAACAAGATGTAAAGTGGATTCCTTTTGAATGTTATAATCAG 529255 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | ||| ||| | || || ||||||||||| |||||||| ||||| |||||||| | | Sbjct 529256 ACAATGTACGTCCATCTTCTAATTGTTTTCCAGCAAAAATTAAACGTTGCTGATCAGGAG 529315 Query 33641 GCACACCT 33648 | | |||| Sbjct 529316 GGATACCT 529323 >seq1332 Length=188647 Score = 98.7 bits (108), Expect = 7e-16 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || ||||||||||| | ||||| || || || ||||||| || Sbjct 169141 AAAATCTGCATTCCTCCTCTCAAACGAAGAACCAAGTGAAGTGTAGATTCTTTTTTAATA 169200 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || |||||||| | ||||| | || || ||||| |||||||||||||| || | ||| Sbjct 169201 TTATAATCGGATAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGT 169260 Query 33631 TGATCTTGCGGCACACCTTCTTTGTC 33656 ||||| |||| | |||||||||||| Sbjct 169261 TGATCGGGCGGTATACCTTCTTTGTC 169286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328662108421440