Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1218 122 2e-22 seq2640 114 3e-20 seq852 111 4e-19 seq1332 84.2 5e-11 >seq1218 Length=332501 Score = 122 bits (134), Expect = 2e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| |||||||||||| ||||| || || || ||||||| || ||| Sbjct 114280 CAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGCGAC 114339 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | ||| || ||||| ||| ||||| || |||||||| ||| ||| ||| || Sbjct 114340 ACAATAGAAAATGTAAAAGCTAAA-ATTCAGGACAAAGAAGGCATTCCGCCCGACCAACA 114398 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||||| ||||| || || |||||||||||||| || | ||| | |||| ||||| | Sbjct 114399 GAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAATAT 114458 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||||||||||| || || || | ||| | ||||| Sbjct 114459 TCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACT 114494 >seq2640 Length=94256 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| ||||| || || || |||||| | ||||| || |||| Sbjct 12690 CAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGAGCCGAGTGAC 12631 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| |||||| ||| || ||||| |||||||| ||| || || || Sbjct 12630 ACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAACAG 12571 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || || || ||||| |||||| | ||||| ||| | || ||| | || ||||| || Sbjct 12570 AGGCTGATATTTGCCGGGAAGCAGCTAGAAGACGGACGCACGTTGTCGGACTACAATATC 12511 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||||||||| || |||||| | || |||||| Sbjct 12510 CAGAAAGAGTCCACCCTTCACTTGGTGTTGAGA 12478 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| |||||| | || || || || |||||||||||||||||| ||| Sbjct 13830 CAGATATTCGTGAAAACGTTGACTGGTAAGACTATCACTTTGGAAGTGGAACCAAGTGAT 13771 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||| || ||||| || || |||||| || || || Sbjct 13770 ACGATCGAGAACGTGAAGGCAAAAATCCAAGACAAGGAGGGAATTCCACCCGATCAGCAG 13711 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || |||||||| |||||||| || | ||| || ||||||| || || Sbjct 13710 AGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACTCTGTCCGATTATAATATC 13651 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||| || ||||| || || ||||||| || Sbjct 13650 CAGAAAGAGAGCACACTTCATCTCGTACTGAGACTGCG 13613 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| ||||| ||||| || |||||| ||||||| || |||| Sbjct 13374 CAGATCTTTGTTAAAACTCTCACCGGAAAGACCATCACTCTGGAAGTAGAGCCGAGTGAC 13315 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| ||| || ||||| ||||| || ||| || || ||| Sbjct 13314 ACTATAGAAAACGTCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCAGCAA 13255 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||| |||||||||||||| |||||||| | || | | ||||| ||| | Sbjct 13254 CGTCTTATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAACATT 13195 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || || || ||||| ||| | || ||| |||| Sbjct 13194 CAAAAGGAATCGACTCTGCACTTGGTATTGCGACT 13160 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| ||||||| ||| |||| Sbjct 13602 CAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAGTGAC 13543 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| ||||| || ||| ||| || || || || |||||||| || || ||| Sbjct 13542 ACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCAGCAA 13483 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| || || ||||||||||| | || | ||||||||||| | Sbjct 13482 CGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAACATT 13423 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||||| || ||||| || || | || ||||| Sbjct 13422 CAAAAAGAGTCGACCCTTCATCTGGTGCTCAGGCTTCG 13385 Score = 98.7 bits (108), Expect = 2e-15 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231 ||||| ||| | ||| || || || ||||| || ||||| |||||||||| ||| Sbjct 13146 CAGAT-TTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGTGA 13088 Query 206232 CACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 || |||| ||||| |||||| || ||||| |||||||||||| || || | Sbjct 13087 TACCATCGAGAATGTAAAAGCAAAA-ATCCAAGACAAAGAAGGAATTCCTCCTGATCAAC 13029 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | |||||||| || || ||||| || || |||||||| | ||| || | || || ||| Sbjct 13028 AGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAACA 12969 Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 | |||||||| || || || || || || ||||| Sbjct 12968 TTCAGAAAGAATCCACACTCCATCTAGTACTGAGA 12934 Score = 91.5 bits (100), Expect = 3e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 |||||| || | |||||| || ||||||||||||| ||| ||||| | ||| || | ||| Sbjct 12478 TCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGACAACGTGCGTCC 12537 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||| |||||||| ||||| || || |||| |||||| Sbjct 12538 GTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGA 12577 >seq852 Length=358492 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||||| || || |||||||| || || |||||||| ||| ||| Sbjct 357639 CAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGTGAT 357580 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| |||||||||||| |||||||| || ||| || || Sbjct 357579 ACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAACAG 357520 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || ||||||||||| || |||||||| | || || ||||||| || | Sbjct 357519 AGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAATATT 357460 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || ||||| ||||| |||||| Sbjct 357459 CAAAAAGAATCTACGCTTCAC 357439 Score = 111 bits (122), Expect = 4e-19 Identities = 140/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCTGACACAGTCGAA 206241 ||||| || || || || || || |||||||| || || ||| |||||| |||| Sbjct 358083 AAAACTCTAACTGGGAAGACTATTACTTTGGAGGTAGAGCCAAGC---GACACAATCGAG 358027 Query 206242 TCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 ||||| |||||||||||| |||||||| ||| ||| ||| || || | || Sbjct 358026 AATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCGCCCGACCAACAGAGGTTGATT 357967 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 |||||||||||||| | ||||| || | |||||| | ||||| ||| | |||||||| Sbjct 357966 TTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCTGATTATAACATTCAGAAAGAA 357907 Query 206362 TCTACTCTTCA 206372 ||||| ||||| Sbjct 357906 TCTACCCTTCA 357896 >seq1332 Length=188647 Score = 84.2 bits (92), Expect = 5e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 206229 TGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGC 206288 |||||| | ||| ||| || |||||||||||| |||||||| || ||| || Sbjct 169320 TGACACCATAGAAAACGTATAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCA 169261 Query 206289 TCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAA 206348 || ||| | || || ||||||||||| || |||||||| | || || ||||||| || Sbjct 169260 ACAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAA 169201 Query 206349 CGTCCAGAAAGAGTCTACTCTTCACCTTGTT 206379 | | ||||| ||||| |||||| | ||| Sbjct 169200 TATTAAAAAAGAATCTACACTTCACTTGGTT 169170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181662459279897