Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1218 116 4e-21 seq2640 113 4e-20 seq852 93.3 4e-14 >seq1218 Length=332501 Score = 116 bits (128), Expect = 4e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| | | ||||||||| | | || ||||| |||||||| || || || ||| Sbjct 114042 ACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGACAGGGT 113983 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| ||||| || || | | |||| ||||||||||||||||| || || || Sbjct 113982 TCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGGATTCC 113923 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||||||||| ||| || ||| | | || | |||||| | ||||| ||||| | Sbjct 113922 TTCTTTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAACTTCCAA 113863 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || ||||||| ||||| | || |||||||| Sbjct 113862 GGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || |||||||||||||| || |||||| ||| |||||||| || || | | Sbjct 113437 GACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCGAGCTGCTTGCCTGCA 113378 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || || ||||| ||||| || || ||||| Sbjct 113377 AAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGGATCTTAGTTTTCACA 113318 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | |||||||| || | || | ||||| ||||| | || || Sbjct 113317 TTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTCCCAGTTAATGTCTTA 113258 Query 132110 ATGAAAATCTGCATGA 132125 | ||| |||||||||| Sbjct 113257 ACGAAGATCTGCATGA 113242 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || |||||||| || | ||| ||| ||||| || ||||| || | | Sbjct 114242 GATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCA 114183 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||||| ||| ||||| || ||||| ||||||||||| || |||||| || | Sbjct 114182 AAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATTTTAGCCTTAACA 114123 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | || || ||||| | || | ||||| |||||||||||||| Sbjct 114122 TTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTG 114063 Query 132110 ATGAAAATCTGCAT 132123 | || || ||||| Sbjct 114062 ACAAATATTTGCAT 114049 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | | | |||||||| ||||| ||||||||| | ||||| ||||| Sbjct 114486 AACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCTTC 114427 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||| || || | | |||| || | |||||| || || || ||||||||||| || Sbjct 114426 CAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCCTG 114367 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| ||| | | ||| | || ||| | ||||| ||||| | || | || || Sbjct 114366 AATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTACTTCCAGTGTTATAGTCTT 114307 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| | || || ||||| Sbjct 114306 TCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | ||||| || || || |||||||| || ||| || ||| || Sbjct 113802 AACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCATCCTC 113743 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || || | | |||| |||||||| ||||| || || || ||||| ||||| Sbjct 113742 AAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCTTG 113683 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| ||||| | || | || || | ||||| || || | ||| | || || Sbjct 113682 GATTTTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATGGTCTT 113623 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || ||||| || || | ||||||||||| Sbjct 113622 TCCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 >seq2640 Length=94256 Score = 113 bits (124), Expect = 4e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| | || || | ||| | | || ||||| |||||||| ||||| || || Sbjct 12928 ACGCAATCTCAGTACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGACAGAGT 12987 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| | ||||| || | | | || || | ||||||||| ||||| || || Sbjct 12988 ACGACCATCTTCTAATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGAATTCC 13047 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 |||||| || |||||| ||| | | || | ||||| ||||||||||||| | Sbjct 13048 TTCTTTGTCTTGGATTTTTGCTTTTACATTCTCGATGGTATCACTCGGCTCCACTTCCAG 13107 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || |||||||| || |||| |||||||||||| Sbjct 13108 GGTGATGGTCTTTCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| ||||| || | | | |||||||| || || |||||||| || || || Sbjct 12475 CAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGACAACGTGCG 12534 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||||| ||||| || |||| | | || || | ||||||||||||||| |||||||| Sbjct 12535 TCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGAATGCCTTC 12594 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||| || |||||| || | | ||| | ||| || ||||||| ||||| | || Sbjct 12595 TTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACTTCTAGAGT 12654 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || || || || ||||||| || |||||||| Sbjct 12655 GATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||| ||| | | | ||||||||||| |||||||| || || || || ||||| Sbjct 12713 ACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGACCGTCTTCT 12772 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||||||||| | |||| ||||| |||||||| || ||||| |||||||| || | Sbjct 12773 AGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTGTCCTGA 12832 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | ||| | ||| || | ||||||||||| | || | || || Sbjct 12833 ATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATGGTCTTT 12892 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| | ||| |||||||| Sbjct 12893 CCGGTAAGTGTTTTCACGAAGATCTGCAT 12921 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||| ||| | | | |||||||||||||||||||| ||| | ||| || |||||| Sbjct 13397 ACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCTTCC 13456 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||||||| |||| ||||| || ||||| ||||| || ||||| || || Sbjct 13457 AATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGG 13516 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 |||||| || | | ||| | || || |||| || ||||| | || | || ||| Sbjct 13517 ATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATGGTCTTA 13576 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || || | |||||||||||| Sbjct 13577 CCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | || || ||||||||||| || || | |||||| | Sbjct 13163 CGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAGAGGGTACGACCA 13222 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||| || |||| | |||| ||||| || ||||| || || ||||| |||||| Sbjct 13223 TCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGAATGCCCTCTTTA 13282 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| || | | ||| | ||| || ||||||| ||||| | || | Sbjct 13283 TCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACTTCCAGAGTGATG 13342 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || |||||||| | || |||||||| Sbjct 13343 GTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||||| |||| | | || ||||||||||| ||||| || | || || Sbjct 12251 CGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGAAAGCGTGCGGCCG 12310 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| |||||||| || | | | || || | ||| || |||||||| || ||||| || Sbjct 12311 TCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCCTTG 12370 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | || || ||||||| ||||| | || | Sbjct 12371 TCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGACTTCCAGTGTTATT 12430 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||||||| ||||| | ||| || ||||| Sbjct 12431 GTTTTACCAGTCAATGTTTTCACGAATATTTGCAT 12465 >seq852 Length=358492 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 ||||| || | ||||| || | | || ||||||||||| || || ||| | ||| Sbjct 357422 CGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGATAAGGTG 357481 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||| | || || |||| | | |||| | ||||||||| || ||||| ||| Sbjct 357482 CGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGTATACCT 357541 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 ||||| || ||| ||| || | | ||| | ||||| | || || ||||| | | Sbjct 357542 TCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACTTCCAAC 357601 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| ||||| |||||||| | || || ||||| Sbjct 357602 GTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| || | ||||||||| | | | || ||||| |||||||| || || || || || Sbjct 357880 CAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGACAAAGTGCG 357939 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||||| || || |||| | || | | |||||| || || || |||||||| Sbjct 357940 ACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGAATGCCTTC 357999 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||| || ||| ||| ||| | | || | || ||| | ||||| || || | || Sbjct 358000 TTTGTCTTGAATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTACCTCCAAAGT 358059 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || ||||| |||||||| | |||||||||||| Sbjct 358060 AATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCAT 358098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476548900958520