Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2640 132 4e-26 seq1218 111 1e-19 seq852 104 2e-17 >seq2640 Length=94256 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| ||||| || || ||| ||||||| |||||||| ||| ||||| || || | Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | | | | || ||| |||||| ||||||||||| | || ||||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || ||||||| ||| || ||||||||||||||| | ||| || || || ||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || || |||||||| ||||| ||| ||||| |||| || || || ||| Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGGA 12922 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || ||||||||||| | || || |||||||| || ||||| ||| || | Sbjct 13378 AATGCAGATCTTTGTTAAAACTCTCACCGGAAAGACCATCACTCTGGAAGTAGAGCCGAG 13319 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || || | | | || || |||||| || ||||| ||| | ||| |||||| Sbjct 13318 TGACACTATAGAAAACGTCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCA 13259 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| | ||||| | ||| || || || ||||||||| | || | ||||| || Sbjct 13258 GCAACGTCTTATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAA 13199 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| ||||| ||||| || || || || |||||| Sbjct 13198 CATTCAAAAGGAATCGACTCTGCACTTGGTATTG 13165 >seq1218 Length=332501 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || ||||||||||| ||||||||||||||||||||| ||||| || || | Sbjct 113820 AATGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAG 113879 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || | | | || ||| || ||| || |||||||| | || ||||| Sbjct 113880 TGATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCA 113939 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| | || || | ||| ||||| || | |||||| ||| || ||||| || Sbjct 113940 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAA 113999 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||| || |||||||| ||||| ||||| || | ||||| || || ||| Sbjct 114000 CATTCAGAAAGAATCGACACTTCATTTGGTTCTTAGGTTGCGTGGTGGA 114048 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| ||||| ||||| |||||||||| || ||||| | ||| |||||| | Sbjct 114048 AATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAG 114107 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || || |||||| |||||||||||| | || || || Sbjct 114108 TGATACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCA 114167 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGA--TTCTAAAACTATGGGCGATTAC 106436 |||| | | || | |||||| |||||| | ||||| | | |||| | |||||| Sbjct 114168 ACAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCG--GATTAC 114225 Query 106437 AACATACAAAAAGAATCTACACTACA 106462 ||||| || |||||||| || || || Sbjct 114226 AACATCCAGAAAGAATCCACGCTTCA 114251 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| | || || ||||| || || ||||| ||| ||| || Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | || ||| |||||| |||||||||||| | || || ||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || || || | ||| || || || || ||||| | ||| | ||| ||||| Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || || ||||| || || || |||||||| | || | |||||||| Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGGA 114504 >seq852 Length=358492 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| | ||||| || |||||||| ||||| |||||| | Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | | | | || || ||| ||| ||||||||||| | || |||||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || || | |||| ||| || || |||||||||||| | || | |||||| || Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 357463 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || |||||||||||||| || || || ||| | | || ||||| || Sbjct 357462 ATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGG 357416 Score = 98.7 bits (108), Expect = 8e-16 Identities = 164/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 106251 AGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACA 106310 || || |||||||| ||||| |||||||| | ||||| ||||| ||||| |||| | Sbjct 358107 AGATTGAAAATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTA 358048 Query 106311 GAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCC 106370 || || |||| | | | | || ||| ||| ||| |||||||||||| | || Sbjct 358047 GAGCCAAGCGACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCG 357988 Query 106371 GTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGC 106430 || ||||| ||| | |||| || || || ||| | ||||| | ||| || Sbjct 357987 CCCGACCAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCT 357928 Query 106431 GATTACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||||| ||||| || ||||||||||| || ||||| || | | || |||||||| Sbjct 357927 GATTATAACATTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGGA 357871 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| ||||| || || ||||| ||||| || |||||||| |||| |||||| | Sbjct 357871 AATGCAGATTTTCGTGAAGACATTAACTGGAAAAACCATTACTTTGGAGGTAGAACCAAG 357812 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 |||| || | | | || || ||||| || || ||||| | || ||| || Sbjct 357811 CGATACTATCGAAAACGTAAAGGCCAAAATCCAGGATAAGGAAGGAATCCCGCCTGACCA 357752 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 || | | |||| ||| || ||||| ||||| || | ||| || |||||||| Sbjct 357751 GCAGCGCTTGATTTTTGCCGGTAAACAGTTAGAGGACGGTCGCACTTTGTCAGATTACAA 357692 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||| || || |||||||| || ||||| || | || || || || || Sbjct 357691 CATCCAGAAGGAATCTACGCTCCATTTGGTGCTTAGATTGCGTGGTGG 357644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402278325229856