Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2640 136 4e-27 seq852 134 1e-26 seq1218 111 1e-19 >seq2640 Length=94256 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| ||||| | |||| || | ||| | || ||||| || || || || ||||||| Sbjct 13605 TTCCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATCGG 13664 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || || ||| |||| |||| ||||| || ||||| ||||| | |||||| || | | Sbjct 13665 ACAGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTG 13724 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | ||||||||| ||| ||| ||||| | | | ||| || || | ||||| Sbjct 13725 GAATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTTCTCGATCGTATCACTTGGTTCCA 13784 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 | |||| ||||| || ||||| ||||| |||||||| |||||||||||| Sbjct 13785 CTTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCATT 13834 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | ||| | ||||| ||| | || ||| ||||||||||||||||||| Sbjct 13377 TTCCACCACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGG 13436 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | ||| || | || |||| || ||||| || || |||| || ||||| || | || Sbjct 13437 AAAGGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAG 13496 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | ||||||||| ||| ||| ||| | | || | | ||||| |||| ||| | Sbjct 13497 GGATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGA 13556 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||| ||||| || ||||| || | || || || || |||||||||| Sbjct 13557 CTTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCATTC 13607 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| || | || ||||||||||| || | || ||| || || || ||||| || | Sbjct 12465 TTCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCG 12524 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||| || || |||| || |||||||| || |||||||||| || ||| || || | || Sbjct 12525 ACAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAG 12584 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| || || ||||| || ||| ||| | || | | ||||| |||| || | Sbjct 12585 GAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTA 12644 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || | ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 12645 CTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | || | ||||| ||| | || ||| ||||| ||||||||||| | | Sbjct 12695 CCGCCACGAAGTCTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGAC 12754 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || ||||| |||||||| || |||| || || || || | || Sbjct 12755 AGTGTGCGACCGTCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGT 12814 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || |||||| ||||| ||| | | || | | ||||| || | ||||| Sbjct 12815 ATACCTTCTTTGTCCTGAATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACT 12874 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || | ||||| || || || || | |||||||| || |||||||||| Sbjct 12875 TCTAAAGTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATCTGCATTC 12923 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||| ||||| | | ||| || | || || | |||||| || ||||| Sbjct 13187 TCCTTTTGAATGTTATAATCAGAGAGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAG 13246 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || ||||| || | |||| || ||| || || || ||| ||| | || Sbjct 13247 ATAAGACGTTGCTGATCAGGGGGAATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTT 13306 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| |||| || || |||| ||||| || || || || | |||||| ||| Sbjct 13307 TCTATAGTGTCACTCGGCTCTACTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACA 13366 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 13367 AAGATCTGCATTC 13379 >seq852 Length=358492 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || || | ||||||||| | |||| ||||| || ||||||||||| | | Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || |||| || | ||| ||||| ||||| ||||| ||||||||||| | || Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| ||| || ||| | || | | || ||||| | ||| ||| Sbjct 357764 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACC 357823 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| || || ||||| || || || || ||||| || |||||||||| Sbjct 357824 TCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATTC 357872 Score = 102 bits (112), Expect = 7e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 35503 TTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTA 35562 || |||||||||||| | | | |||| ||| || || |||||||| || || || Sbjct 357181 TTAATTTCCACCACGAAGACGAAGTACCAGATGCAAAGTGGATTCCTTTTGGATATTATA 357240 Query 35563 ATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 ||| | | ||| || |||| |||| ||||| || ||||| || | || |||||| || Sbjct 357241 ATCAGAAAGGGTGCGACCGTCCTCCAATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATC 357300 Query 35623 CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCG 35681 | |||| | || || || ||| ||| || || | | || | | || ||||| | Sbjct 357301 AGGTGGAATACCTTCTTTATCTTGGAT-TTTAGCTTTTACATTTTCTATGGTATCGCTAG 357359 Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||||| | || || |||||||| |||| ||||| |||||||| ||||| Sbjct 357360 GTTCCACCTCTAAAGTTATAGTTTTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || || | | ||||| || | |||| || |||||||| || ||||||| Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || || | ||||| || ||||| || || | ||| || || | || Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || ||||| |||||| ||| | || | | || || || | ||| || Sbjct 357536 ATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACT 357595 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||| || ||||| || || | ||||||||||||||| ||||| Sbjct 357596 TCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 >seq1218 Length=332501 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || || | || | || | ||| || || || ||||||||||| | Sbjct 114275 CCACCACGCAATCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGAT 114216 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| ||| |||| ||||| || || |||||||| || || || || ||||| | |||| Sbjct 114215 AGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGA 114156 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || || |||||| ||| ||| | ||| | | || | | || || || | ||| || Sbjct 114155 ATGCCTTCTTTGTCC-TGAATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAAC 114097 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || | || || ||||| || |||| |||||| |||||||| ||||||| Sbjct 114096 TTCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCATTC 114047 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| ||||| | |||||||| | || || || |||||||| ||||| | Sbjct 114049 TTCCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTG 113990 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || |||||| | || ||||||||||| || ||||| |||| ||||| || || | | Sbjct 113989 ACAGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTG 113930 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | || || ||| ||||| || | | | | | || || || | || | Sbjct 113929 GGATTCCTTCTTTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAA 113870 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||| || || || || || ||||| ||||| |||||||||||||||| Sbjct 113869 CTTCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCATTC 113819 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| | || | ||| | ||| |||||| ||||||||||| || | | Sbjct 113470 CCACCACGGAGCCTGAGAACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 113411 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || ||||| || | |||||||| || | ||| Sbjct 113410 AGGGTACGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGA 113351 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| |||| | || | | || || || | |||||| Sbjct 113350 ATACCTTCCTTATCCTGGATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACC 113291 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || ||||| || || || || || || || |||||||| Sbjct 113290 TCAAGAGTAATTGTTTTCCCAGTTAATGTCTTAACGAAGATCTGCAT 113244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450734675641560