Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq852 143 3e-29 seq1218 134 1e-26 seq2640 132 5e-26 seq1332 93.3 4e-14 >seq852 Length=358492 Score = 143 bits (158), Expect = 3e-29 Identities = 173/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 |||||||||| | || | || | || || || ||||| || |||||||| || || | Sbjct 357870 TTCCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAG 357929 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||| | || || ||| ||||| || || || || |||||||| | ||| || |||||| Sbjct 357930 ACAAAG-TGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGC 357988 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||||||||| |||||||| ||| ||| || || | ||||||| | || Sbjct 357989 GGAATGCCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCT 358048 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || | |||||| || || || |||| ||||||||||||||| |||||||| Sbjct 358049 ACCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCATTTT 358101 Score = 123 bits (136), Expect = 3e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTG 134569 || ||||| |||||||| || |||||||| || | ||| | || || ||| || | ||| Sbjct 357668 TGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAG-TGCGACCGTCCTCTAACTG 357726 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||||||||| |||||||| || ||||| || ||||| || || || ||||| Sbjct 357727 TTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCTTCCTTATCCTGGATTTT 357786 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || || | || ||| | ||| || || | |||||||||||| || || Sbjct 357787 GGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAATGGTTTTTCCAGT 357846 Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714 ||| || || |||||||| |||||| Sbjct 357847 TAATGTCTTCACGAAAATCTGCATT 357871 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| ||||| ||||| |||||||| || || ||| | |||| || || || | || Sbjct 357439 GTGAAGCGTAGATTCTTTTTGAATATTATAATCGGATAAGGTGCGACCATCTTCTAATTG 357498 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || |||||||| || | ||| |||||||||||||| |||||||| |||||||| || Sbjct 357499 CTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGTATACCTTCTTTGTCTTGAATCTT 357558 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | ||||| || | || || | ||| || || | ||||||||||| || || Sbjct 357559 TGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACTTCCAACGTAATGGTTTTTCCAGT 357618 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | |||||| || || |||||||| Sbjct 357619 AAGAGTTTTCACAAATATTTGCAT 357642 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | || || | || || || | |||||||||||||| || || || || Sbjct 357185 TTTCCACCACGAAGACGAAGTACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCA 357244 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || |||| || ||| || | || || ||||||||||| | | ||||||||| || Sbjct 357245 GAAAGGGTGCGACCGTCCTCCAATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGT 357304 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || |||||||| ||||| ||||| ||| || || | || ||| | |||| Sbjct 357305 GGAATACCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATGGTATCGCTAGGTTCC 357364 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || |||||||| || | |||||||| || |||||||| Sbjct 357365 ACCTCTAAAGTTATAGTTTTACCAGTCAGGGTTTTAACAAATATTTGCAT 357414 >seq1218 Length=332501 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || || || ||||| |||||||||||||| | ||| || || ||| Sbjct 113452 ACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCG 113393 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||||||||| || | |||||||||||||||||| || ||||| || || || Sbjct 113392 AGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGG 113333 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||| || || | ||| || | ||||| || |||||||| ||||| Sbjct 113332 ATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTC 113273 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || |||||||| || ||||| Sbjct 113272 CCAGTTAATGTCTTAACGAAGATCTGCAT 113244 Score = 122 bits (134), Expect = 9e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| ||||||||||| || || |||||||| || | |||| | ||| || Sbjct 114257 ACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCC 114198 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || ||||| || ||||| || || ||||| || ||||||||||| || ||| Sbjct 114197 AGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGA 114138 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| || || || | ||| || | ||| || || | |||||| ||||| Sbjct 114137 ATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTG 114078 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | |||||| || || ||||||||| Sbjct 114077 CCAGTCAGAGTTTTGACAAATATTTGCATT 114048 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||||||||| |||| | || | || || || || || || ||||| ||||||||| Sbjct 114506 TTTCCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCG 114447 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || || || ||| || | ||| || |||||||| |||| | ||| || |||||| Sbjct 114446 GAAAGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGC 114387 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||||||||| || |||||||| ||| || || | ||||||| | || Sbjct 114386 GGAATGCCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCT 114327 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || ||||| | ||||| || || |||||||| Sbjct 114326 ACTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||||| | ||||| || || || || ||||| || || |||||||| Sbjct 113821 TTCCACCACGGAGTCTGAGAACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTG 113762 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | |||| | || || ||||| ||||| ||||| || | |||||||||||| || | Sbjct 113761 ACAGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTG 113702 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || ||||| ||||| ||| || || | ||||| | || | Sbjct 113701 GAATACCTTCCTTATCTTGGATTTTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTA 113642 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || ||||| || || || | || || || ||||| ||||| Sbjct 113641 CCTCCAGCGTGATGGTCTTTCCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 >seq2640 Length=94256 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| |||||||| || | ||| || || ||||||||||||||||| || || Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAG 13210 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || | ||| || || ||||| || | ||| |||||||| || || Sbjct 13211 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGA 13270 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| ||||| ||||| |||||| ||||| || | ||||| || || || Sbjct 13271 ATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACT 13330 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || ||||| ||||| || ||||| | ||||||||| || || |||||| Sbjct 13331 TCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCATT 13378 Score = 123 bits (136), Expect = 3e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| || || || || || || |||||||||||||| ||| || |||| || || || Sbjct 13396 CACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCTTC 13455 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 | ||||| || || || |||| ||| ||||||||||| || || ||||| || || || Sbjct 13456 CAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTG 13515 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 |||||| ||||| || | |||||| || ||| || || || || ||||| || Sbjct 13516 GATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAGGGTGATGGTCTT 13575 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 |||||| | || || |||||||| |||||| Sbjct 13576 ACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 |||||||||| | || |||||| | ||| || ||||| || || || || |||||||| | Sbjct 12465 TTCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCG 12524 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||||| || | ||| || ||||| || || ||||| |||| | ||| ||||| || Sbjct 12525 ACAACG-TGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGA 12583 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||||||||| ||||| |||||| || || || | ||||| || || Sbjct 12584 GGAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCT 12643 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| ||||| || || || | ||||| || || || ||||| Sbjct 12644 ACTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | |||| || ||||| || || ||| || || || || || || ||| Sbjct 13605 TTCCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATCGG 13664 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | ||| || | || || || ||||| ||||| | |||||||||||| | Sbjct 13665 ACAGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTG 13724 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || ||||| |||||| || || || | || || | ||||| Sbjct 13725 GAATTCCCTCCTTGTCTTGGATTTTTGCCTTCACGTTCTCGATCGTATCACTTGGTTCCA 13784 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| || || ||||| || || ||||| ||||| || |||||| Sbjct 13785 CTTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCATT 13834 >seq1332 Length=188647 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 134551 TGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 ||||| ||| | | |||||| || ||||||||||| |||||||| || ||| || | Sbjct 168989 TGTGACCGTCCGCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCATACGGGATTC 169048 Query 134611 CTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGA 134670 |||| || || || ||||| ||| || || | || ||| | ||| || || | Sbjct 169049 CTTCCTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCA 169108 Query 134671 GAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 |||||||||||| || ||||| || || |||||||| |||||| Sbjct 169109 AAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATT 169152 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||||||||| | || | || | ||| || || ||||| |||| ||| || || ||| Sbjct 169151 TTCCTCCTCTCAAACGAAGAACCAAGTGAAGTGTAGATTCTTTTTTAATATTATAATCGG 169210 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | |||| || || || | || || || |||||||| || | ||| |||||||||| Sbjct 169211 ATAAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCG 169270 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTT 134630 |||| |||||||| |||||||| ||| Sbjct 169271 GTATACCTTCTTTGTCTTGAATCTTT 169296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505332338111640