Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1427 178 2e-39 seq1105 176 6e-39 seq725 161 1e-34 seq224 123 3e-23 seq8822 95.1 2e-14 >seq1427 Length=229792 Score = 178 bits (196), Expect = 2e-39 Identities = 672/1038 (65%), Gaps = 26/1038 (3%) Strand=Plus/Plus Query 162493 GTTATGACCCCTATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCATTT 162552 ||| |||| ||| || || |||||||| ||| | || ||| || | || || ||| Sbjct 217308 GTTTTGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTT 217367 Query 162553 AAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAGTT 162612 ||||||| ||| || |||| ||| || | ||||||||||| ||||| || |||||| Sbjct 217368 AAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTT 217427 Query 162613 CATAAAAACAATAACAAGTTTGCGTTCTTTAGTAGAAACATGAAACCCGTTTTACAACAC 162672 |||||||| ||| | ||| | | |||||| ||| | ||||| || ||| || Sbjct 217428 CATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAACAGCAT 217487 Query 162673 AAAGTTGATTATCTAAAAGAATACCTTCCCATAGCATTCAAAAAAGCTACATCTATTATC 162732 ||| | || | ||||| || | | | ||| || || ||| | | | || Sbjct 217488 AAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACTTGATT 217547 Query 162733 TTGGATTCTGAAATTGTTCTAGTCG--ACGAACATA-ATGTACCACTTCCGTTTGGAAGT 162789 | || ||||||||| | ||| | | || || | | || |||| | || ||||| | | Sbjct 217548 CTTGACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGTACT 217607 Query 162790 TTAGGAATACATAAAAAGAAAGAATATAAAAACTCTAATATGTGTTTGTTCGTGTTTGAT 162849 ||||| | || || |||| | | ||| | | | | | ||||| || ||||||||| Sbjct 217608 TTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTGTTTGAT 217667 Query 162850 TGTTTATACTTTGATGGATTCGACATGACTGATATTCCATTGGTTGATCGACGATCGTTT 162909 ||| |||| | ||||| || | | ||| ||| | || ||||| || Sbjct 217668 TGTATATATTACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAGACGAAAAATT 217727 Query 162910 CTCAAAGATGTAATGACAGAAATACCCAATAGAATAGTATTTTCAGAATTGACAAATATT 162969 || |||| ||| |||| | || || |||||| ||| ||| | |||| Sbjct 217728 CTGCAAGAAAATATGGAAGAAGTTAAAGATCACATTAAATTTTCTGAAATGAAATTTATT 217787 Query 162970 ACTA-ACGAGTCTCAACTAACAGATGT-ATTAGAT-GATGCACTAACAAGAAAATTAGAA 163026 | | ||| || ||| ||| | || | || || | |||||| ||||||| Sbjct 217788 AAAACTCGA-AAAGAATTAAATGATATGATGACATCAATATTCAAACAAG--GATTAGAA 217844 Query 163027 GGGTTGGTTTTAAAAGAT--ATTAATGGAATATACGAGCCAGGAAAACGTAGATGGCTTA 163084 || | |||||||||||| ||| | | | || | || |||||||| ||||| | Sbjct 217845 GGACTTGTTTTAAAAGATCCATTGA--GTACTTATAAACCTGGAAAACGACATTGGCTGA 217902 Query 163085 AAATAAAGAAAGACTACTTGAACAATGGTTCAATGGCAGACTCTGCAGATTTAGTAGTAC 163144 || | || ||||| || | | | ||| ||||| ||| |||||||||||| || Sbjct 217903 AAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTAGTTGTTT 217962 Query 163145 TTGGGGCATATTATGGAAAAGGAATAAAGGGTGGAATGATGGCTGTCTTTTTGATGGGTT 163204 | || ||||||| ||| | || | || |||||||||||| | | ||||| ||||||| Sbjct 217963 TAGGTGCATATTTTGGTACTGGTAGTAAAGGTGGAATGATGTCAATTTTTTTAATGGGTT 218022 Query 163205 GCTATGATGACGAGTCTGGTAAATGGAAGACAGTAACTAAATGTTC----CGGACACGAT 163260 ||| ||| | || || ||| ||||| |||||| || | ||||| | Sbjct 218023 GCTTCGATAAGACATCCCAAAAGTGGTGTACAGTTACTAAA-GTACATGGAGGACATACT 218081 Query 163261 GATAATACGTTAAGGGTTCTACAAGACCAATTAAAGATGATTAAAATTAGTAAGGATCCa 163320 ||| ||| ||||| ||||| | ||| | ||| ||| || || || Sbjct 218082 GATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTTAACAATGACACA 218141 Query 163321 aaaaaaGTACCAGAGTGGTTGGTAGTTAATAAAATCTAT-ATTCCAGATTTTGTAGCAGA 163379 | | | || | ||||| ||||| ||||||| | |||||||||||||| | Sbjct 218142 GATA---TCCCTCATTGGTTAAACGTTAA-AAAATCTTTAATTCCAGATTTTGTTTGTAA 218197 Query 163380 GGATCCAAAACAATCTCCTATCTGGGAAATTTCAGGAGCTGAGTTTACTTCATCCAAATC 163439 ||||||||| ||| | | ||||| ||| ||||||| || ||| || | | || | Sbjct 218198 AGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTTCTAAAGCTGAAGC 218257 Query 163440 TCATACAGCAAATGGAATATCCATTAGATTTCCTAGATTTACTAGGATCAGAAATGATAA 163499 |||||||||| |||||||| || || |||||| | ||||| || | ||||||| Sbjct 218258 TCATACAGCA---GGAATATCAATAAGGTTTCCTCGTGTTACTTTAATTCGTTATGATAA 218314 Query 163500 AACGTGGAAAGAATCAAC 163517 ||| |||||||| |||| Sbjct 218315 AACTTGGAAAGAGGCAAC 218332 >seq1105 Length=277015 Score = 176 bits (194), Expect = 6e-39 Identities = 181/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 69506 TATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGAC 69565 |||||| | ||| ||||| | |||||| ||| ||||||| |||||||| |||| Sbjct 85923 TATATAACTCTTCAAATTCTTTACCCCAACTGTCAAATAATCCAGAACATTCATGAGGAC 85864 Query 69566 ACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAA 69625 ||||||| ||||||| ||||||| | | ||||| || |||||||| |||||||||||||| Sbjct 85863 ACATCAACGACCACATATCATCAGCTTCAACTCTTTGCATAAATAAATCGGGAATCCAAA 85804 Query 69626 GAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGA 69685 | || ||| | ||| | | | | |||||| ||||| ||||||||||| | ||| | Sbjct 85803 GTGCATAAAATAAATCACGAGCACGACATTCTTCCTTTCCGGTATTTTTTTTTAAATCAA 85744 Query 69686 GAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTC 69742 |||| || | |||||| | |||||| ||||| |||||||| || | | | || |||| Sbjct 85743 GAAATTCAAAAATATCTGCATGCCACGGTTCCAGATATATAGCAAAGGCACCGGGTC 85687 Score = 123 bits (136), Expect = 3e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 68442 CCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATT 68501 |||||| || |||||||||||||||| || |||| |||| || || |||||||| || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 68502 CATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTT 68561 | || ||||||||||| |||||||| || || ||||| ||||| || ||||| || Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 68562 TTGAGGAATTTCCCAAATAGT 68582 |||||| |||||||||| ||| Sbjct 102536 TTGAGGTATTTCCCAAACAGT 102516 Score = 114 bits (126), Expect = 2e-20 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 ||||||||||| ||||| ||||| | ||||||||||| || || ||||| | ||| Sbjct 100932 TGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTATCGAT 100873 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 |||||||| || |||||||| ||||| || ||||| ||||| |||| || | |||||| Sbjct 100872 TCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAAACTA 100813 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 100812 TTTCTTACACCAT 100800 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 ||||| | ||||||| |||||| |||| | || ||||||||||||||||| | |||| Sbjct 91315 GATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGTAAT 91256 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 | || |||||||||||||| || || | |||| | | ||||||| ||| || Sbjct 91255 GAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTGTCA 91196 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 || ||||| | |||||| | ||| || || || ||||| ||||| || || || Sbjct 91195 AACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATGGGA 91136 Query 69127 CTATGTCTCTTATTTGA 69143 | ||| |||| ||| || Sbjct 91135 CGATGCCTCTGATTAGA 91119 >seq725 Length=361488 Score = 161 bits (178), Expect = 1e-34 Identities = 168/218 (77%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || |||||||| ||| ||||| | ||||||||| ||||| | |||||| Sbjct 94746 TCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTTTT 94805 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 | |||||| || || ||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct 94806 AACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATGCA 94865 Query 39761 ACAAGTCTCTCTCCGTAACTTGTA-TC--ATTATGTATCCACTTCTGTGCCCAATCAGCT 39817 |||| | ||||| | | | | || || || |||||| || |||||| |||||| Sbjct 94866 ACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAGCT 94925 Query 39818 TTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855 || | || || || || | ||| ||||| |||||||| Sbjct 94926 TTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 39999 CCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAA 40058 ||||||||||||| ||||| ||||||||||| ||||| || || |||||||| ||||| Sbjct 98372 CCAAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAA 98431 Query 40059 AATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 40118 ||| |||||||| |||| | ||| | | | ||| ||||| | || |||| Sbjct 98432 AATGCTTTTCATCATCATTCAAGAGTTCCCAATGAGAAAGATCCTTTGAAAGGTCAACTT 98491 Query 40119 CTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATT 40178 ||||| | ||||| || || || || || || |||||||| | ||| |||||| |||||| Sbjct 98492 CTTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATT 98551 Query 40179 GTATTGGAAAAATAACAAATCTATTTGGATTTT 40211 || |||||||| ||||| | ||||||||| Sbjct 98552 CAATGGGAAAAATGACAAAGCGTCTTGGATTTT 98584 >seq224 Length=538787 Score = 123 bits (136), Expect = 3e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 ||| |||| || |||||||||| ||| || | |||| |||||||||||| |||||| Sbjct 19410 GATTCATTGTAAGTTTCATAAGATCCAAATTGGTGTGCTAATTCACAACTTGCTTCTAAT 19469 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 ||||| |||||||| ||||| ||||| | ||| | | ||||||||| |||||| Sbjct 19470 GCACCATAATAAATAGTTTCAAAAATTTGTACATTCAACTTCTGTGCTTCTTCACTATCA 19529 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 || ||||| | |||||||||||||| || ||||| || || | ||| || || || Sbjct 19530 AAAGGATATCTCATTAGAATAAATGCATCAGCTAATCCTTGTACACTAATTCCTATTGGA 19589 Query 69127 CTATGTCT 69134 | || ||| Sbjct 19590 CGATATCT 19597 Score = 113 bits (124), Expect = 6e-20 Identities = 132/176 (75%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 68440 CTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATA 68499 ||||| | || ||||||||||| || | || |||| | ||||| | || ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 68500 TTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAA-TACT 68558 | ||||| || |||||||| || ||||| ||||||||||| |||||||| |||| |||| Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 68559 CTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGC 68614 ||||| || |||||||||| ||| || | | |||| | ||||||||||| || Sbjct 7680 -TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGGAATGC 7734 >seq8822 Length=1639 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 ||||| |||||||| | ||| || || || ||||| |||||||||||||| | | || Sbjct 936 GTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAACCATTTTTCAGATAATAATTTA 995 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 ||||||||||| || | || || || | ||| ||||| | | || ||||||||| Sbjct 996 TATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATTCCGACGGATACTCGCATCAAC 1055 Query 70111 ATATGCTGAGGTCGTTC 70127 |||||||| |||| ||| Sbjct 1056 ATATGCTGTGGTCTTTC 1072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686819012433480