Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq725 140 3e-28 seq1745 113 4e-20 seq665 87.8 1e-12 >seq725 Length=361488 Score = 140 bits (154), Expect = 3e-28 Identities = 169/226 (75%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 44038 ATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTA 44096 ||| |||||||| ||||| ||| |||| |||| ||| | ||||| |||||||| | | Sbjct 94967 ATTATTTAATGCAATAGAGACATTACCCTGCGTCAAAAGA-AAAGCTGACTGGGCAATAA 94909 Query 44097 AATGGATAAATTCAAATGATT----CTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTG 44152 | ||||||||| | ||| | | ||||||||||| |||| || ||||| | || Sbjct 94908 ATTGGATAAATG-ATCTGACTTCCACATTTGGAGAACGTGTTGTTGCATTTGCGGCAGTC 94850 Query 44153 GAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTG 44212 ||||| || |||||||| ||||||||||| || || ||||||||||| || | ||| | Sbjct 94849 GAAGGAATCTTCTTTTCTGGATCGTTTGCAGCAATTTTTTGGTTAAAAAAGAGGGGTCTT 94790 Query 44213 ATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAG 44258 |||||||| || || || ||||| ||||| || | ||||||| Sbjct 94789 ATGCCTGGATTAACATTCAGTAATGAATTAATCAGCAGAGATGAAG 94744 Score = 98.7 bits (108), Expect = 8e-16 Identities = 95/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 43894 TTTGGTTAG-TCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGT 43952 ||| | ||| ||| ||| |||||||||||| || | |||||||| || || ||||| | Sbjct 98267 TTTAGGTAGATCGTTTTAGTCAAGAAGTTCAAGTAACCGAAGCACGCTGCTTCTATGGCT 98208 Query 43953 TTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACA 44012 |||| ||||| ||||||||| ||||||| || |||||||| || | || ||||| || | Sbjct 98207 TTCAGATTGCAATAGAAAATGTTCATTCAGAGATGTACAGCCTGTTAATTGATACATATA 98148 Query 44013 T 44013 | Sbjct 98147 T 98147 >seq1745 Length=180974 Score = 113 bits (124), Expect = 4e-20 Identities = 144/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 19336 AAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCG 19395 ||||||||| | ||| | ||||||| ||| || || ||| ||||||||| ||||| || Sbjct 33674 AAACATGTTAGAGGAATATTGCTTTTTGGACCTCCTGGTACTGGAAAAACTTTAATGGCT 33615 Query 19396 AGAGAACTTAGTAAA---TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAA 19452 | || || | || ||| | || ||||| || || |||||||||||| | Sbjct 33614 CGCCAAATTGGACAAATGTTAAATGCACGTGAACCT---AAGATAGTAAATGGTCCTCAG 33558 Query 19453 ATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCT 19512 || || ||||||||||||| |||| |||| |||| || || | | |||||||| || Sbjct 33557 ATTCTAGATAAATATGTAGGAGAATCAGAAGCAAATATAAGAAGGCTATTTGCTGAAGCA 33498 Query 19513 GAAGAAGAACAAAAACG 19529 ||||||||| ||||||| Sbjct 33497 GAAGAAGAAGAAAAACG 33481 >seq665 Length=373109 Score = 87.8 bits (96), Expect = 1e-12 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924 ||| ||| | || || |||||||| ||||| | | |||||| ||||||||||||||| || Sbjct 69737 AGGAGATTTAGGGCCAGTTTATGGTTTTCAATGGAGACATTATGGAGCAAAATATGAAAC 69678 Query 40925 TATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGAT 40984 ||| | | |||||| | ||||||| ||||| ||| | || ||||||| || Sbjct 69677 AATGCATACAGATTATTCTGGACAAGGAATTGATCAGTTAAAAGATGTGATAGATAAAAT 69618 Query 40985 TAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAAC 41035 |||| |||| || | || | ||||| || | || ||||| ||||| Sbjct 69617 TAAAAATAATCCTAATGACAGAAGGATAATTATGAGTGCATGGAATCCAAC 69567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397405346344285