Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq852 131 1e-25 seq2640 118 9e-22 seq1218 100 2e-16 >seq852 Length=358492 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| || | |||||| || | |||||| |||||||||||||| || ||| Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| | || || ||||| |||| | | ||||||||| ||||| Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| ||||| || ||||| || | | |||||| || || ||| ||||||| Sbjct 357536 ATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTTTCTATGGTATCACTGGGTTCAACT 357595 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || | ||| || || |||||||||||||| |||||||| Sbjct 357596 TCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| | | |||||||| | |||||| || || || || ||||| || | Sbjct 357644 CCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGAC 357703 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||| || | |||||||||||| |||| | ||||| || || ||||| Sbjct 357704 AAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 357763 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || ||||| ||| ||| || | | |||| | ||| || | | ||| || Sbjct 357764 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACC 357823 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||| || | ||| || || | || ||||| || || ||||| Sbjct 357824 TCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCAT 357870 >seq2640 Length=94256 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| | ||| ||||| || | || || ||||| || ||||||||||| | Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| ||||||| ||||| || ||||| | || || | ||||||||| || || Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || ||||| || || || || | | |||||| |||||| | | || ||| Sbjct 12587 ATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACT 12646 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||||| || | || ||||| || ||||| |||||||| |||||| Sbjct 12647 TCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCATA 12694 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||| ||| | || || |||||||| || ||||| || || |||| ||||||| Sbjct 12713 ACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGACCGTCTTCT 12772 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||| ||| | || ||||| |||||||| || || | ||| ||||| || Sbjct 12773 AGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCTTTGTCCTGA 12832 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | |||| | |||||| ||| || ||||||| ||| || | || Sbjct 12833 ATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAAAGTGATGGTCTTT 12892 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||||||| ||||| ||||| Sbjct 12893 CCGGTAAGTGTTTTCACGAAGATCTGCAT 12921 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| ||||| ||||| || || ||||||||||||||||| || | |||| || Sbjct 12251 CGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGAAAGCGTGCGGCCG 12310 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| |||||||| || || |||| || | ||| || || || || | ||| || || Sbjct 12311 TCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCCTTG 12370 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | | | || | ||||| | | || ||||| || ||||| Sbjct 12371 TCTTGTATCTTCGCCTTGACGTTCTCGATCGTGTCACTCGGCTCGACTTCCAGTGTTATT 12430 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || |||| |||||||| || |||||||| Sbjct 12431 GTTTTACCAGTCAATGTTTTCACGAATATTTGCAT 12465 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||||||||| || | || || || |||||||| || || || | | | || | Sbjct 13163 CGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAGAGGGTACGACCA 13222 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | ||| || ||||| | || ||||| || ||||| || || | ||||||||| Sbjct 13223 TCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGAATGCCCTCTTTA 13282 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || || || || | | |||||| |||||| | | || ||||| ||||| || Sbjct 13283 TCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACTTCCAGAGTGATG 13342 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || |||||||| |||||||| ||||| Sbjct 13343 GTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 >seq1218 Length=332501 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || ||||| || || ||||| || | | ||||| ||||||| || ||||| || Sbjct 114246 CGTGGATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCCGTCTTCCAGTTGTTTTCC 114187 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || | || | ||| ||||| || || || | || ||||| || || || || Sbjct 114186 CGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATTTTAGCCTT 114127 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | |||| | || || ||| ||||||||||| ||| |||| |||||| |||||||| Sbjct 114126 AACATTTTCAATTGTATCACTGGGTTCAACTTCTAAAGTAATAGTTTTGCCAGTCAGAGT 114067 Query 27230 TTTCACAAAGATTTGCAT 27247 ||| ||||| |||||||| Sbjct 114066 TTTGACAAATATTTGCAT 114049 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || ||||||||||| || | |||| | || || ||||| || || Sbjct 113789 GTCGACTCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCC 113730 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||||||||| ||||| || || | ||| || ||||| ||| ||| |||| Sbjct 113729 GCAAAGATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTGGCTTTC 113670 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | |||| ||||| ||| || || || || || || | || |||||||| || Sbjct 113669 ACATTCTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATGGTCTTTCCCGTCAGGGTC 113610 Query 27231 TTCACAAAGATTTGCAT 27247 |||||||| || ||||| Sbjct 113609 TTCACAAAAATCTGCAT 113593 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||||| | |||||||| | || || ||||| ||||| || || || | Sbjct 114047 CCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGAC 113988 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| ||||| || || || | || |||||||||||||| || || Sbjct 113987 AGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGG 113928 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || |||||||| |||||| ||| | | |||| ||| || | | |||||| Sbjct 113927 ATTCCTTCTTTATCCTGAATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAACT 113868 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || | ||||| |||| ||||| ||||| || ||||| Sbjct 113867 TCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||| |||||||| || | | || | || |||||||| || || Sbjct 113440 GTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCGAGCTGCTTGCCT 113381 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||||||||| ||||| ||||| | ||| || ||||| |||||| ||||| Sbjct 113380 GCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGGATCTTAGTTTTC 113321 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | || || | | || || || ||||| || | ||| || || | || Sbjct 113320 ACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTCCCAGTTAATGTC 113261 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 113260 TTAACGAAGATCTGCAT 113244 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | || || ||||| ||||||||||||||| | | || ||||||| Sbjct 114485 ACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCTTCC 114426 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||| || || || | || || | |||||| || ||||| | || ||||| || Sbjct 114425 AACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCCTGA 114366 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || ||| | |||||| ||||| ||| || ||||| || ||||||| || Sbjct 114365 ATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTACTTCCAGTGTTATAGTCTTT 114306 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || ||||| ||||| ||||||||| Sbjct 114305 CCGGTGAGCGTTTTGACAAATATTTGCATA 114276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424880244368184