Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2640 120 2e-22 seq852 116 2e-21 seq1218 96.9 2e-15 >seq2640 Length=94256 Score = 120 bits (132), Expect = 2e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||||| ||||| || | ||| || |||||||| || ||||||||| Sbjct 12239 CCACCTCTGAGACGCAGAACCAAGTGTAAGGTGGATTCTTTTTGAATATTGTAATCTGAA 12298 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || ||||| || ||||| || | | ||| ||||| || || Sbjct 12299 AGCGTGCGGCCGTCTTCTAGCTGTTTTCCCGCAAAAATAAGTCTCTGCTGGTCTGGAGGA 12358 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | || ||||||||| ||| || | || ||| | || ||||| ||| ||| | Sbjct 12359 ATACCTTCCTTGTCTTGTATC-TTCGCCTTGACGTTCTCGATCGTGTCACTCG-GCTCGA 12416 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| ||||| |||||||| || || |||||||| || || ||||| Sbjct 12417 CTTCCAGTGTTATTGTTTTACCAGTCAATGTTTTCACGAATATTTGCAT 12465 Score = 118 bits (130), Expect = 7e-22 Identities = 153/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| || |||||||| || || || |||||||| || || || ||| ||||||| | ||| Sbjct 13630 ATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGACAGAGTGCGCCCGTCTTCCAATTG 13689 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || || ||||| || || | ||| || || || || | ||||||||||||| ||| || Sbjct 13690 CTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTGGAATTCCCTCCTTGTCTTGGAT-TT 13748 Query 34623 TTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACCG 34680 ||| || ||| | || || || | | | |||||||||| || || || ||||| Sbjct 13749 TTGCCTTCACGTTCTCGATCGTATCACTTGGT-TCCACTTCCAAAGTGATAGTCTTACCA 13807 Query 34681 GTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||||||||| || |||||||| Sbjct 13808 GTCAACGTTTTCACGAATATCTGCAT 13833 Score = 116 bits (128), Expect = 2e-21 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| ||| || || ||| ||||||||||| ||||| ||||| || || | ||||| Sbjct 13396 CACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCTTC 13455 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | |||||||||||| || || | ||| || || || || || | ||| |||||||| Sbjct 13456 CAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTG 13515 Query 34617 GATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTT 34674 ||| ||||| || || | |||||||| ||| | || ||||||| ||| || || Sbjct 13516 GAT-TTTTGCCTTGACATTTTCGATTGTGTCACTCGGT-TCGACTTCCAGGGTGATGGTC 13573 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||||| | || || || ||||||||||| Sbjct 13574 TTACCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 111 bits (122), Expect = 1e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || ||||| ||||| || ||||| |||||||||||||||||||| || Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAG 13210 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | || || |||||||| || | ||| || || || || || Sbjct 13211 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGA 13270 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTC-TTCGCTCTCCA 34657 | ||||| || ||| || ||||| || ||| | || ||||| ||| ||| | Sbjct 13271 ATGCCCTCTTTATCT-TGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCG-GCTCTA 13328 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || || || || ||||| | ||||| ||||| |||||||| Sbjct 13329 CTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 Score = 91.5 bits (100), Expect = 9e-14 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 |||||| ||| || || ||||||||||| || || || || || | ||||| | ||| Sbjct 12946 ATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGACAGAGTACGACCATCTTCTAATTG 13005 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 ||| || ||||| || | | |||||| || || || | ||| || |||||| ||| || Sbjct 13006 TTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGGAT-TT 13064 Query 34623 TTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACCG 34680 ||| ||| || | || || || ||| ||||||||||| ||| || || || || Sbjct 13065 TTGCTTTTACATTCTCGATGGTATCACTCG-GCTCCACTTCCAGGGTGATGGTCTTTCCA 13123 Query 34681 GTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || ||||||||||| Sbjct 13124 GTCAGTGTCTTTACGAAAATCTGCAT 13149 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||||||||| || || ||| ||| || || || || || || || Sbjct 12467 CCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGAC 12526 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || ||||||| || || || ||||||||||| | | |||||| || || || Sbjct 12527 AACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGA 12586 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTC-TTCGCTCTCCA 34657 | || || |||||| || ||||| || ||| | || ||||| ||| ||| | Sbjct 12587 ATGCCTTCTTTGTCT-TGTATTTTTGCCTTTACGTTTTCTATAGTGTCACTCG-GCTCTA 12644 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || || || || || | ||||| ||||| |||||||| Sbjct 12645 CTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 >seq852 Length=358492 Score = 116 bits (128), Expect = 2e-21 Identities = 180/255 (71%), Gaps = 4/255 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | |||||||| || || || || |||||||||||||| || Sbjct 357872 CCTCCTCTCAAACGAAGAACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGAC 357931 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || ||||||| ||||| || ||||| || || || | ||||||||| ||||| Sbjct 357932 AAAGTGCGACCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGA 357991 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGT--CTTCGCTCTCCA 34657 | || || |||||| |||||| ||||| ||||||| ||| ||||| | Sbjct 357992 ATGCCTTCTTTGTCTTGAATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCT--A 358049 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTAT 34717 | |||| || || || || || |||| ||||| || ||||||||||| || | | || Sbjct 358050 CCTCCAAAGTAATAGTCTTCCCAGTTAGAGTTTTAACGAAAATCTGCATTTTCAATCTAA 358109 Query 34718 GACGTTGAAAAAGAT 34732 | | |||||||| Sbjct 358110 GGGGGAAAAAAAGAT 358124 Score = 111 bits (122), Expect = 1e-19 Identities = 157/217 (72%), Gaps = 14/217 (6%) Strand=Plus/Plus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||||||||| || ||||| || ||||| |||||||| | || || |||| || Sbjct 357661 CACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGTGCGACCGTCCTC 357720 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC--- 34613 | |||||||||||||| || || ||||| ||||| ||||| | ||| ||||| || Sbjct 357721 TAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCTTCCTTATCCTG 357780 Query 34614 ---TGTGATCTTT-TGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTA 34669 | || |||| ||||| ||||| || | ||| | ||| || |||| || | Sbjct 357781 GATTTTGGCCTTTACGTTTT--CGATAGTATCG---CTTGGTTCT--ACCTCCAAAGTAA 357833 Query 34670 TCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| || ||||| || ||||| ||||||||||| Sbjct 357834 TGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCAT 357870 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| | ||| | ||||| || || || || |||||||| |||||||| || Sbjct 357416 CCACCTCGCAAACGAAGTACCAAGTGAAGCGTAGATTCTTTTTGAATATTATAATCGGAT 357475 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | ||||| | ||| || |||||||| ||||| | |||||| || ||||| Sbjct 357476 AAGGTGCGACCATCTTCTAATTGCTTTCCGGCAAAAATTAATCTCTGTTGATCGGGCGGT 357535 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| |||||| | || ||| | || || || | || || Sbjct 357536 ATACCTTCTTTGTCTTGAATCTTT-GCCTTGACGTTTTCTATGGTATCACTGGGTTCAAC 357594 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || ||||| || || | ||||||||||| || ||||| Sbjct 357595 TTCCAACGTAATGGTTTTTCCAGTAAGAGTTTTCACAAATATTTGCAT 357642 >seq1218 Length=332501 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| || || || || ||||||||||||||||| || ||||| | ||||| Sbjct 114029 ACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGACAGGGTTCGGCCATCTTCC 113970 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || || ||||| || | ||||||||| || || || | ||| || || || Sbjct 113969 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGGATTCCTTCTTTATCCTGA 113910 Query 34618 ATCTTTTGTTTTA-ACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 ||||| ||||| | | | | | | ||| | ||| ||||||| ||| || || | Sbjct 113909 ATCTTGGCTTTTACATTCTCTATAGTATCACTTGG--CTCAACTTCCAAGGTAATGGTCT 113852 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || ||||| ||||| |||||||| Sbjct 113851 TGCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314689489384481