Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2640 161 9e-35 seq852 158 1e-33 seq1218 149 5e-31 seq1332 113 4e-20 >seq2640 Length=94256 Score = 161 bits (178), Expect = 9e-35 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| | || || || ||||| |||||| Sbjct 13605 ATGCAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAGT 13546 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| |||||| || ||||| ||||| || || |||||||| Sbjct 13545 GACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCAG 13486 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||| |||||||||||||| || ||| |||||||||||||| Sbjct 13485 CAACGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAAC 13426 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||||||| ||||||||| | ||| |||| Sbjct 13425 ATTCAAAAAGAGTCGACCCTTCATCTGGT 13397 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| ||||| ||| | || ||||| ||||| || ||| Sbjct 13377 ATGCAGATCTTTGTTAAAACTCTCACCGGAAAGACCATCACTCTGGAAGTAGAGCCGAGT 13318 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| |||||| ||||| ||||| ||||| || || ||||| Sbjct 13317 GACACTATAGAAAACGTCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCAG 13258 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||||| || || || ||||| || ||| | || ||||| ||| Sbjct 13257 CAACGTCTTATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAAC 13198 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| ||||| | || ||||| ||||| || | ||||| || Sbjct 13197 ATTCAAAAGGAATCGACTCTGCACTTGGTATTGCGACTGAGAGGTGGTAT 13148 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || ||||| ||| | || ||| | |||||||| || Sbjct 12921 ATGCAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGAGCCCAGT 12862 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||||||||| ||||||||||||||| Sbjct 12861 GACACTATCGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGTATACCACCCGATCAA 12802 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| || ||||| | |||||| || || | || ||||||||| Sbjct 12801 CAACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCGCACACTGTCAGATTACAAC 12742 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || ||||| ||||||||| | ||| |||| Sbjct 12741 ATCCAAAAAGAGTCGACCCTTCATCTGGT 12713 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||||||||| || || || ||| | || ||||| ||||| || ||| Sbjct 12693 ATGCAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGAGCCGAGT 12634 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || |||||| ||||||||||||||||| || || |||||| Sbjct 12633 GACACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAA 12574 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 ||| | | |||| ||||| || || | |||||| | || |||| || || ||||| Sbjct 12573 CAGAGGCTGATATTTGCCGGGAAGCAGCTAGAAGAC-GGACGCACGTTGTCGGACTACAA 12515 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| ||| | || ||||| ||| | ||| | || || || Sbjct 12514 TATCCAGAAAGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGAGGAAT 12464 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| || ||||| || ||| | || || || |||||||| ||| Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || ||| |||||| |||||||||||||| || || || |||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || |||||||| ||||| || || | || || || ||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || || | ||| | || || | ||||| ||||| || Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGGAAT 12920 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || ||||| |||| || ||| |||| ||| | ||||||||||| Sbjct 13833 ATGCAGATATTCGTGAAAACGTTGACTGGTAAGACTATCACTTTGGAAGTGGAACCAAGT 13774 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| |||| || || |||||| |||||||| || || || ||||||||||| Sbjct 13773 GATACGATCGAGAACGTGAAGGCAAAAATCCAAGACAAGGAGGGAATTCCACCCGATCAG 13714 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || |||||||||||| | || | |||||||| || Sbjct 13713 CAGAGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACTCTGTCCGATTATAAT 13654 Query 27168 ATTCAAAAGGAG 27179 || || || ||| Sbjct 13653 ATCCAGAAAGAG 13642 >seq852 Length=358492 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||| || || ||| |||||||| | || || || || | Sbjct 358098 ATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTAGAGCCAAGC 358039 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || ||| ||| |||||||||||||||||||| || ||||| ||| Sbjct 358038 GACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCGCCCGACCAA 357979 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || ||| | |||||| || || | || ||||| ||| Sbjct 357978 CAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCTGATTATAAC 357919 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || ||| | ||||||||| | |||||| | || || || Sbjct 357918 ATTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGGAAT 357869 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| |||||||| || || || | ||||| | ||||| ||||| Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | ||||| | ||||| || ||||| ||||| || ||| | |||||||| || Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 357463 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | || ||||| | |||||||| ||||| || Sbjct 357462 ATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGGTAT 357413 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || | || || || | |||||| | || || ||||| | Sbjct 357870 ATGCAGATTTTCGTGAAGACATTAACTGGAAAAACCATTACTTTGGAGGTAGAACCAAGC 357811 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||||| || || || ||||| || || || || || Sbjct 357810 GATACTATCGAAAACGTAAAGGCCAAAATCCAGGATAAGGAAGGAATCCCGCCTGACCAG 357751 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||| ||||| || || ||| || || | || ||||||||| Sbjct 357750 CAGCGCTTGATTTTTGCCGGTAAACAGTTAGAGGACGGTCGCACTTTGTCAGATTACAAC 357691 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | |||||||| | | ||||| ||||| || Sbjct 357690 ATCCAGAAGGAATCTACGCTCCATTTGGTGCTTAGATTGCGTGGTGGGAT 357641 >seq1218 Length=332501 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| ||||||||||| ||||| |||||||| | ||||| ||||| Sbjct 114049 ATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAGT 114108 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || |||||||| |||||||||||||| || ||||| ||| Sbjct 114109 GATACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCAA 114168 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | || || |||||| |||||||| | ||| | || ||||||||| Sbjct 114169 CAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCGGATTACAAC 114228 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || | || | ||| | | ||||| ||||| || Sbjct 114229 ATCCAGAAAGAATCCACGCTTCACCTCGTTCTCAGATTGCGTGGTGGTAT 114278 Score = 145 bits (160), Expect = 7e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| ||||| || ||||| ||| |||| || || ||||| || || | Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| |||||||| |||||||||||||| || ||||| ||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || ||||||||| || || ||||||| ||||| Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||| || ||||||||| | ||||| ||| Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTT 114486 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| ||||| |||| |||||| | ||||| | ||||| || || Sbjct 113821 ATGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAGT 113880 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || ||| || ||||| || |||||||| || ||||| |||||| Sbjct 113881 GATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCAA 113940 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || ||||||| | ||| | || ||||| ||| Sbjct 113941 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAAC 114000 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || ||||| | ||||||||| | | ||||| ||||| || Sbjct 114001 ATTCAGAAAGAATCGACACTTCATTTGGTTCTTAGGTTGCGTGGTGGAAT 114050 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| || ||| | || || || || || || || Sbjct 113593 ATGCAGATTTTTGTGAAGACCCTGACGGGAAAGACCATCACGCTGGAGGTAGAGCCCAGT 113652 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || ||| ||||| ||||| || ||||| || ||||| ||||| Sbjct 113653 GACACGATAGAGAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATTCCACCTGATCAG 113712 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | || || | ||| | || || ||||| Sbjct 113713 CAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCAGACTACAAT 113772 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||||||| | ||| | ||| Sbjct 113773 ATCCAGAAGGAGTCGACCCTCCATCTCGTT 113802 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || | || || || | ||||||||||| ||||| || Sbjct 113243 CATGCAGATCTTCGTTAAGACATTAACTGGGAAAACAATTACTCTTGAGGTGGAGCCTAG 113302 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | || ||| || || || || || ||||| || || |||||||| Sbjct 113303 TGATACAATTGAAAATGTGAAAACTAAGATCCAGGATAAGGAAGGTATTCCGCCCGATCA 113362 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | || ||||| || | || || || ||| | || || ||||| Sbjct 113363 GCAGCGTCTCATCTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACCCTGTCTGACTACAA 113422 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||| |||||||| || | ||| | ||| Sbjct 113423 CATTCAGAAGGAGTCTACTCTCCATCTCGTT 113453 >seq1332 Length=188647 Score = 113 bits (124), Expect = 4e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 27071 AAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAA 27130 ||| ||||||||||||||||| ||||| |||||||||||| | ||||| | ||||| || Sbjct 169296 AAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAACAGAGATTAATTTTTGCCGGAAA 169237 Query 27131 ACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACA 27190 ||||| ||||| || ||| | |||||||| || ||| |||| || || || | || Sbjct 169236 GCAATTAGAAGATGGTCGCACCTTATCCGATTATAATATTAAAAAAGAATCTACACTTCA 169177 Query 27191 TTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| | |||||| | || || || Sbjct 169176 CTTGGTTCTTCGTTTGAGAGGAGGAAT 169150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434861550728640