Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2640 178 3e-39 seq1218 152 1e-31 seq852 122 2e-22 >seq2640 Length=94256 Score = 178 bits (196), Expect = 3e-39 Identities = 173/223 (78%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| || || || || ||||| || ||||||||||| ||||| ||||| | |||||| Sbjct 13384 ACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGT 13443 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| || || || |||||||| || ||||| || || ||||| | ||| Sbjct 13444 GCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCC 13503 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||| ||| || || |||||||| |||||| ||| || || || Sbjct 13504 TTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTCGACTTCCAG 13563 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| ||||| || ||||| ||||| || || | ||||||| Sbjct 13564 GGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 Score = 159 bits (176), Expect = 8e-34 Identities = 169/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || || || ||||| || ||||||||||||||||| ||||| | || || Sbjct 12700 ACGAAGTCTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGT 12759 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| ||||| || || |||||||| || |||||||| || || || | || Sbjct 12760 GCGACCGTCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACC 12819 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| |||||||| ||||| || || |||||||| |||||| | || || || | Sbjct 12820 TTCTTTGTCCTGAATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTCCACTTCTAA 12879 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||| |||||||| || || || || || || | ||||||| Sbjct 12880 AGTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATCTGCATT 12922 Score = 149 bits (164), Expect = 1e-30 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| ||||| || || ||||| ||||||||||| | ||||| | |||||||| | ||| Sbjct 13174 GTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAGAGGGTACGACCATCTTCTAACTG 13233 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || |||||||| ||||| || ||||| |||| || || || || || || || Sbjct 13234 CTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGAATGCCCTCTTTATCTTGTATTTT 13293 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || |||||||| || |||||| || || || |||||||| |||||||| || Sbjct 13294 TGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACTTCCAGAGTGATGGTCTTTCCGGT 13353 Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115 |||||| || ||||| | ||||||| Sbjct 13354 GAGAGTTTTAACAAAGATCTGCATT 13378 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| ||||||||||| ||||| || || |||| | || | ||| ||||| ||||| Sbjct 12490 GTGAAGGGTGGACTCTTTCTGGATATTGTAGTCCGACAACGTGCGTCCGTCTTCTAGCTG 12549 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || || || || | ||||| || ||||||| ||||| ||||| || || || Sbjct 12550 CTTCCCGGCAAATATCAGCCTCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGTATTTT 12609 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || |||||||| || |||||| || || || |||||||| ||||| ||||| Sbjct 12610 TGCCTTTACGTTTTCTATAGTGTCACTCGGCTCTACTTCTAGAGTGATGGTCTTCCCCGT 12669 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 ||| || |||||||| | |||||| Sbjct 12670 GAGTGTTTTTACAAAGATCTGCAT 12693 Score = 100 bits (110), Expect = 7e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 ||||| |||||||| || || ||||| | ||| || | || ||||| ||||| || || Sbjct 12269 GTGGATTCTTTTTGAATATTGTAATCTGAAAGCGTGCGGCCGTCTTCTAGCTGTTTTCCC 12328 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || ||||| | || ||||| ||||||| ||||||||||| || ||||| || Sbjct 12329 GCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGTATCTTCGCCTTG 12388 Query 211038 ACGTTTTCGATGGTGTCA 211055 ||||| ||||| |||||| Sbjct 12389 ACGTTCTCGATCGTGTCA 12406 >seq1218 Length=332501 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| ||||| || || || || || || ||||| || ||||| || || || | ||||| Sbjct 113814 ACGGAGTCTGAGAACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGACAGGGT 113755 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| || ||||| || || || || ||||| |||| || Sbjct 113754 GCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGAATACC 113695 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| || ||||| || |||||| || || || |||||| | || ||||| || Sbjct 113694 TTCCTTATCTTGGATTTTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTACCTCCAG 113635 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||||||||| || ||||| ||||| | |||||| Sbjct 113634 CGTGATGGTCTTTCCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 Score = 150 bits (166), Expect = 4e-31 Identities = 167/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||| || || |||||||| ||||| ||||| |||||||| ||||||| ||||| Sbjct 114270 ACGCAATCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGATAGGGT 114211 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || |||||||| || || || || ||||| | ||||||||||| ||||||| || Sbjct 114210 GCGCCCGTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCC 114151 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| |||||||| || || || || ||||| || || ||| | |||||| || | Sbjct 114150 TTCTTTGTCCTGAATTTTAGCCTTAACATTTTCAATTGTATCACTGGGTTCAACTTCTAA 114091 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| || || || || || ||||| || ||||| | |||||| Sbjct 114090 AGTAATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCATT 114048 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || || || || || || ||||| ||||| || || ||||| || || | ||||| Sbjct 113465 ACGGAGCCTGAGAACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGT 113406 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || |||||||||||||| ||||| || || || || || || |||| || Sbjct 113405 ACGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACC 113346 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| |||||| ||||| || || ||| || ||||| || Sbjct 113345 TTCCTTATCCTGGATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAG 113286 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || || || | ||||| || || | |||||| Sbjct 113285 AGTAATTGTTTTCCCAGTTAATGTCTTAACGAAGATCTGCAT 113244 Score = 127 bits (140), Expect = 5e-24 Identities = 153/207 (74%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || || ||||| || ||||||||||| | ||||| | ||||||||||||||| Sbjct 114023 TGAAGTGTCGATTCTTTCTGAATGTTATAATCTGACAGGGTTCGGCCATCTTCCAGCTGC 113964 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || ||||| || || ||||| || || || | |||||| || ||||| ||||| Sbjct 113963 TTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGGATTCCTTCTTTATCCTGAATCTTG 113904 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATCGTCTTTCCC 211088 ||| || || || || || ||| ||| ||||| || | || || ||||| || Sbjct 113903 GCTTTTACATTCTCTATAGTATCA---CTTGGCTCAACTTCCAAGGTAATGGTCTTGCCA 113847 Query 211089 GTGAGAGTCTTTACAAACACCTGCATT 211115 || | || || ||||| | ||||||| Sbjct 113846 GTCAAGGTTTTAACAAATATCTGCATT 113820 >seq852 Length=358492 Score = 122 bits (134), Expect = 2e-22 Identities = 153/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || || ||||| || ||||||||||| | | || | || ||||| || ||| Sbjct 357896 TGAAGGGTAGATTCTTTCTGAATGTTATAATCAGACAAAGTGCGACCGTCTTCGAGTTGC 357955 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || ||||| || | | |||||||| || |||| ||||| ||||| || |||||| Sbjct 357956 TTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGAATGCCTTCTTTGTCTTGAATCTTT 358015 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATCGTCTTTCCC 211088 ||| || || ||||| ||||| |||| || ||||| | ||| || ||||| || Sbjct 358016 GCTTTTACATTCTCGATTGTGTC---GCTTGGCTCTACCTCCAAAGTAATAGTCTTCCCA 358072 Query 211089 GTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || || || | ||||||||| Sbjct 358073 GTTAGAGTTTTAACGAAAATCTGCATTTT 358101 Score = 102 bits (112), Expect = 2e-16 Identities = 159/226 (70%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||| || || | || || || || || || |||||||| ||||| | | || Sbjct 357649 ACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGT 357708 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || | ||| || || || || || | ||| || |||||||| || | ||| Sbjct 357709 GCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCC 357768 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTC 211069 |||||| |||||||| || || ||||||||||| || || ||| ||| ||||| Sbjct 357769 TTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATC---GCTTGGTTCTACCTC 357825 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||| || || ||||| || | ||||| || || | ||||||| Sbjct 357826 CAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158996696452805