Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2640 98.7 9e-16 seq1218 96.9 3e-15 seq852 93.3 4e-14 >seq2640 Length=94256 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | || || ||||| || || || || ||||| || |||||||| | Sbjct 13151 CCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAG 13210 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || | ||| || || ||||| |||||||| ||||| || | ||| Sbjct 13211 AGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGA 13270 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || |||||| || ||||| |||| | | | || || |||| ||| || Sbjct 13271 ATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACT 13330 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | ||||| || || |||||||||||||| ||||| Sbjct 13331 TCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || ||||||||||| || ||||||||||||| || || || |||| || | || Sbjct 13630 ATGAAGTGTGCTCTCTTTCTGGATATTATAATCGGACAGAGTGCGCCCGTCTTCCAATTG 13689 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 || || ||||| || | | |||||| |||| || | | ||| ||||| |||||| Sbjct 13690 CTTTCCAGCAAAGATCAATCTCTGCTGATCGGGTGGAATTCCCTCCTTGTCTTGGATTTT 13749 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 || | || | | |||||| || | ||||| |||| |||||| | || || || Sbjct 13750 TGCCTTCACGTTCTCGATCGTATCACTTGGTTCCACTTCCAAAGTGATAGTCTTACCAGT 13809 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || |||||| || || || ||||| Sbjct 13810 CAACGTTTTCACGAATATCTGCAT 13833 >seq1218 Length=332501 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || ||||| || || | || || || | || |||||||| ||||||||||| Sbjct 113784 CTCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCAAA 113725 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||| || | || | | || || || |||||| ||| | | Sbjct 113724 GATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTGGCTTTCACATT 113665 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| || || | ||| || |||| |||||| | ||||||||||| || || || Sbjct 113664 CTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATGGTCTTTCCCGTCAGGGTCTTCAC 113605 Query 39273 AAAGATTTGCATC 39285 ||| || |||||| Sbjct 113604 AAAAATCTGCATC 113592 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| || || ||||| || || |||||||| | || ||||| | || || Sbjct 114029 ACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGACAGGGTTCGGCCATCTTCC 113970 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| ||||| || |||||||| || || |||||| || ||||| ||| Sbjct 113969 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGGATTCCT-TCTTTATCCTG 113911 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || ||| | || | | ||||| || | ||| || |||| || || | || Sbjct 113910 AATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAACTTCCAAGGTAATGGTCTT 113851 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| ||||||||||| || ||||| Sbjct 113850 GCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 >seq852 Length=358492 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| | ||| || ||||| ||||||||||| | ||| || || |||| || Sbjct 357206 ACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATCAGAAAGGGTGCGACCGTCCTCC 357265 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 | || || || ||||| ||||| | |||||| || | || | | ||||| || | Sbjct 357266 AATTGCTTTCCTGCAAAAATAAGCCTCTGCTGATCAGGTGGAATACCTTCTTTATCTTGG 357325 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 ||||| ||| | | | | |||||||| | ||||| || | || ||| |||| Sbjct 357326 ATTTTAGCTTTTACATTTTCTATGGTATCGCTAGGTTCCACCTCTAAAGTTATAGTTTTA 357385 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| ||||||||||| |||||||| Sbjct 357386 CCAGTCAGGGTTTTAACAAATATTTGCAT 357414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429490856695241