Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2640 154 1e-32 seq1218 140 2e-28 seq852 138 8e-28 seq1332 109 4e-19 >seq2640 Length=94256 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| |||||||| || || |||||||| ||||| || | | Sbjct 12693 ATGCAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGAGCCGAGT 12634 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | |||| |||| |||||| ||||||||||| | || ||||||||| Sbjct 12633 GACACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAA 12574 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | ||||||||||| || || || ||||||| |||||| || || ||||| Sbjct 12573 CAGAGGCTGATATTTGCCGGGAAGCAGCTAGAAGACGGACGCACGTTGTCGGACTACAAT 12514 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || ||||||||||| | || || || || || ||| |||||||| Sbjct 12513 ATCCAGAAAGAGTCCACCCTTCACTTGGTGTTGAGATTGAGAGGAGGA 12466 Score = 136 bits (150), Expect = 3e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| ||||| || || ||||| || |||||| | ||||| || ||| Sbjct 12922 AATGCAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGAGCCCAG 12863 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | |||| |||| || ||| |||||||||||| |||| || ||||| Sbjct 12862 TGACACTATCGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGTATACCACCCGATCA 12803 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || || || ||||| || ||||||| ||||| | |||||||| Sbjct 12802 ACAACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCGCACACTGTCAGATTACAA 12743 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||||||||| || Sbjct 12742 CATCCAAAAAGAGTCGAC 12725 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || |||||||| || || || ||||| || ||||| || | | Sbjct 13606 AATGCAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAG 13547 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | |||| | || |||||| ||||| ||||| | || || ||||| Sbjct 13546 TGACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCA 13487 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || || ||||| |||||| ||||||| | ||||| | ||||||||| Sbjct 13486 GCAACGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAA 13427 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| ||||||||||| || | ||| | || | ||| | || || ||| Sbjct 13426 CATTCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGGCTTCGTGGTGGA 13378 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || || ||||| || ||||| || ||||| || | | Sbjct 13149 ATGCAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGAGCCGAGT 13090 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | ||||| |||||| ||||||||||| | || || |||||| Sbjct 13089 GATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAA 13030 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || |||||| | ||||| | || ||| | || || ||| Sbjct 13029 CAGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAAC 12970 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || ||||| |||||| | ||| |||| | || ||||| || ||| Sbjct 12969 ATTCAGAAAGAATCCACACTCCATCTAGTACTGAGATTGCGTGGTGGA 12922 >seq1218 Length=332501 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || ||||| || || || ||||| || ||| | |||||||| ||| Sbjct 114048 AATGCAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAG 114107 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||||| | |||| | |||| || ||||||||||| | || || || | Sbjct 114108 TGATACAATTGAAAATGTTAAGGCTAAAA-TTCAGGACAAAGAAGGCATTCCTCCCGACC 114166 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| |||||||| ||||| || |||||||||||||||| ||||| || ||||||| Sbjct 114167 AACAACGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCGGATTACA 114226 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||| || ||||| ||||| | || | ||| | || ||||| || || Sbjct 114227 ACATCCAGAAAGAATCCACGCTTCACCTCGTTCTCAGATTGCGTGGTGG 114275 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| ||||| ||||| || || || || ||||| || ||| Sbjct 114277 ATGCAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGAGCCCAGC 114336 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | |||| ||||| |||||| ||||||||||| | ||||| || ||| Sbjct 114337 GACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAA 114396 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || || || ||||||||| || ||| | ||| ||||| Sbjct 114397 CAGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAAT 114456 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || |||||||| || | ||||||||| | || || |||||||| Sbjct 114457 ATTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGAGGAGGA 114504 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || ||||||||| | || || || || || || | |||||||| | | Sbjct 113820 AATGCAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGAGCCAAG 113879 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | || | ||||| || ||| || |||||||| | || |||||||| Sbjct 113880 TGATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCA 113939 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||| ||||| || |||||||| | || || | ||||| || Sbjct 113940 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAA 113999 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || ||||| || ||| | ||||| ||| | |||||||| || ||| Sbjct 114000 CATTCAGAAAGAATCGACACTTCATTTGGTTCTTAGGTTGCGTGGTGGA 114048 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| |||||||| || ||||| || || || || ||| Sbjct 113593 ATGCAGATTTTTGTGAAGACCCTGACGGGAAAGACCATCACGCTGGAGGTAGAGCCCAGT 113652 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | ||||| || || |||||| | || || ||||| Sbjct 113653 GACACGATAGAGAATGTGAAAGC-CAAAATCCAAGATAAGGAAGGTATTCCACCTGATCA 113711 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| ||||| || || || || | ||||| | || ||||| Sbjct 113712 GCAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCAGACTACAA 113771 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || ||||| || | ||| | ||| | || | || || ||| Sbjct 113772 TATCCAGAAGGAGTCGACCCTCCATCTCGTTCTCAGACTCCGTGGTGGA 113820 >seq852 Length=358492 Score = 138 bits (152), Expect = 8e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||||||||| || || || || || || ||| | || || || | Sbjct 358101 AAAATGCAGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTAGAGCCA 358042 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | ||||| ||| ||| ||||||||||| | ||||| || Sbjct 358041 AGCGACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCGCCCGAC 357982 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 |||||| | || || || ||||| || ||||| ||||||| |||||||| ||||| Sbjct 357981 CAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCTGATTAT 357922 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||||| || ||||| || || | ||||| ||| | | ||| |||||||| Sbjct 357921 AACATTCAGAAAGAATCTACCCTTCATTTGGTTCTTCGTTTGAGAGGAGGA 357871 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| || || |||||||| || || | |||||||| ||| Sbjct 357642 ATGCAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGT 357583 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| | || ||| ||| |||||||||||| ||||||| |||||| Sbjct 357582 GATACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 357523 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | ||||| |||||||| || ||| | ||||| | ||||| ||| |||||| || Sbjct 357522 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 357463 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || | || || || | | |||||||| || Sbjct 357462 ATTCAAAAAGAATCTACGCTTCACTTGGTACTTCGTTTGCGAGGTGG 357416 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || || | || |||||||| || ||| | || || || | | Sbjct 357871 AATGCAGATTTTCGTGAAGACATTAACTGGAAAAACCATTACTTTGGAGGTAGAACCAAG 357812 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | |||| |||| ||||| || || ||||| | ||||| || || Sbjct 357811 CGATACTATCGAAAACGTAAAGGCCAAAATCCAGGATAAGGAAGGAATCCCGCCTGACCA 357752 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || |||||||| ||||| | || |||| |||||||| |||||||| Sbjct 357751 GCAGCGCTTGATTTTTGCCGGTAAACAGTTAGAGGACGGTCGCACTTTGTCAGATTACAA 357692 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || | ||||| || | || ||||| || || Sbjct 357691 CATCCAGAAGGAATCTACGCTCCATTTGGTGCTTAGATTGCGTGGTGG 357644 Score = 89.7 bits (98), Expect = 3e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||||||||| || || ||||| || ||| | || || || | | Sbjct 357414 ATGCAAATATTTGTTAAAACCCTGACTGGTAAAACTATAACTTTAGAGGTGGAACCTAGC 357355 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| ||||| ||||| || ||||||||| | || || ||||| Sbjct 357354 GATACCATAGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATTCCACCTGATCAG 357295 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || || ||| |||| |||| ||||| | ||||| || Sbjct 357294 CAGAGGCTTATTTTTGCAGGAAAGCAATTGGAGGACGGTCGCACCCTTTCTGATTATAAT 357235 Query 23791 ATACAAAAAGAGTCCACATTACAT 23814 || ||||| || ||||| || ||| Sbjct 357234 ATCCAAAAGGAATCCACTTTGCAT 357211 >seq1332 Length=188647 Score = 109 bits (120), Expect = 4e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 |||||||||||| ||||||| ||||||||| | ||||| |||||||| || ||| | ||| Sbjct 169286 GACAAAGAAGGTATACCGCCCGATCAACAGAGATTAATTTTTGCCGGAAAGCAATTAGAA 169227 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | ||||| ||| |||||| || || ||||||| || ||| | || || ||| | Sbjct 169226 GATGGTCGCACCTTATCCGATTATAATATTAAAAAAGAATCTACACTTCACTTGGTTCTT 169167 Query 23824 AGGTTGCGAGGAGGA 23838 | ||| |||||||| Sbjct 169166 CGTTTGAGAGGAGGA 169152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337966522472156