Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1427 163 4e-35 seq725 136 5e-27 seq8822 127 3e-24 seq1105 122 1e-22 seq224 113 6e-20 seq546 93.3 6e-14 >seq1427 Length=229792 Score = 163 bits (180), Expect = 4e-35 Identities = 675/1041 (65%), Gaps = 44/1041 (4%) Strand=Plus/Plus Query 170966 GTTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTT 171025 ||| ||| |||| | || ||| |||| ||| | ||| |||||| | || || ||| Sbjct 217308 GTTTTGACTCCTGTTCTACCAATGCTAGCCGAACCTTGTCGTTCTGTAGAAAATGCCTTT 217367 Query 171026 AAAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTT 171085 ||||||| ||| || |||| ||| || | ||||||||||| ||||| || |||||| Sbjct 217368 AAAAAATGCCCAAACGGCATGTATGCTGAGATTAAATATGATGGAGAACGTGTTCAAGTT 217427 Query 171086 CATAAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACAT 171145 |||||||| ||||| |||| | | ||||| ||| | ||||| || || ||| Sbjct 217428 CATAAAAAAGGTAATACTTTTACATATTTTAGTCGAAGTTTAAAACCTGTACAACAGCAT 217487 Query 171146 AAAGTTGATTATCTCAAGGAATACCTTCCTAAAGCATTTAAAAAAGCTA---CCTCTATT 171202 ||| | || |||| || || | ||||||| ||| || ||| | || || Sbjct 217488 AAAATATCACATTTCAAAGATCACATAGCTAAAGCTTTTCAACAAGGAAAAGACTTGAT- 217546 Query 171203 ATCTTGGATTCCGAAATTGTTCTAGTTGATGAACATA---ATGTTCCACTTCCGTTTGGA 171259 |||| || || |||||| | ||| | ||| | | | || ||| | || ||||| Sbjct 217547 -TCTT-GACTCTGAAATTCTGCTATTAGATACAAAAACAGATAAACCATTGCCATTTGGT 217604 Query 171260 AGTCTAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTT 171319 | | |||| | ||||| |||| | | || |||| | | | ||||| || || ||| Sbjct 217605 ACTTTAGGTGTTCACAAGAAGACTGCCTTTAAGGATGCAACTGTTTGTTTATTTGTGTTT 217664 Query 171320 GATTGTTTATACTTTGATGGATTTGACATGACTGATATCCCATTGGTTGATAGACGATCG 171379 |||||| |||| | ||||| || | | ||| || | || |||||| Sbjct 217665 GATTGTATATATTACAATGGAAAAGATCTAATGGATTGTCCTCTTAAAGAAAGACGAAAA 217724 Query 171380 TTTCTAACAGACATAATGACAGAAATACCTAATAGA----ATAGTATTTTCTGAATCGAC 171435 |||| ||| | ||| |||| | ||| ||| || |||||||||| || Sbjct 217725 ATTCTGCAAGAAAATATGGAAGAAGT---TAA-AGATCACATTAAATTTTCTGAAATGAA 217780 Query 171436 AAATATTACCA-ACGAATCTCATCTAACAGATGTATTGGAA--GATGTACTAACGAGAAA 171492 | ||||| | |||| || ||| ||| | || | || | | ||| || Sbjct 217781 ATTTATTAAAACTCGAAAAGAAT-TAAATGATATGATGACATCAATATTCAAACAAG--G 217837 Query 171493 ACTAGAAGGTTTGGTTTTAAAGGAT--ATTAATGGTATGTACGAGCCCGGAAAACGTAGA 171550 | ||||||| | |||||||| ||| ||| | ||| || | || |||||||| Sbjct 217838 ATTAGAAGGACTTGTTTTAAAAGATCCATTGA--GTACTTATAAACCTGGAAAACGACAT 217895 Query 171551 TGGCTTAAAATAAAGAGAGACTACTTGAACGAGGGTTCGATGGCGGATTCTGCAGATCTA 171610 ||||| ||| | || | ||| || | | |||||| ||||| || ||||||| || Sbjct 217896 TGGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGATTTA 217955 Query 171611 GTAGTATTGGGGGCATATTATGGAAAAGGAACAAAGGGTGGAATGATGGCAGTCTTTTTG 171670 || || || || ||||||| ||| | || | || |||||||||||| || | ||||| Sbjct 217956 GTTGTTTTAGGTGCATATTTTGGTACTGGTAGTAAAGGTGGAATGATGTCAATTTTTTTA 218015 Query 171671 ATGGGCTGTTATGACGATGAC-TCTGGTAAATGGAAAACTGTGACTAAATGTTC----TG 171725 ||||| || | || | ||| || || ||| || || |||||| || | | Sbjct 218016 ATGGGTTGCTTCGA-TAAGACATCCCAAAAGTGGTGTACAGTTACTAAA-GTACATGGAG 218073 Query 171726 GACATGATGATAATACTTTAAGGGCTTTACAGGACCAATTAAAGATGATTAAAATTAATA 171785 ||||| |||| |||| ||||| ||||| | ||| | ||| |||| | Sbjct 218074 GACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTTAACA 218133 Query 171786 AGAACCCCCAAAAAATTCCAGAGTGGTTAGTAGTTAATAAAATATAT-ATTCCCGATTTT 171844 | || | | | || || | |||||| ||||| ||||| | | ||||| |||||| Sbjct 218134 ATGACAC---AGATATCCCTCATTGGTTAAACGTTAA-AAAATCTTTAATTCCAGATTTT 218189 Query 171845 G-TAGTAGAGGATCCTAAACAATCTCCTATATGGGAGATTTCAGGAGCTGAGTTCACATC 171903 | | ||| | ||||| ||| ||| | ||||||||||| ||||||| || || | Sbjct 218190 GTTTGTA-AAGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTTCTAA 218248 Query 171904 ATCCAAGTCGCATACAGCAAATGGAATATCTATTAGATTTCCTAGATTCACTAGGATTAG 171963 | | | | ||||||||| |||||||| || || |||||| | | ||| ||| | Sbjct 218249 AGCTGAAGCTCATACAGCA---GGAATATCAATAAGGTTTCCTCGTGTTACTTTAATTCG 218305 Query 171964 AGACGATAAAACATGGAAAGA 171984 | |||||||| |||||||| Sbjct 218306 TTATGATAAAACTTGGAAAGA 218326 >seq725 Length=361488 Score = 136 bits (150), Expect = 5e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 ||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct 98372 CCAAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAA 98431 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 ||| ||||| | | ||| | ||| | | | ||| ||||| | || |||| Sbjct 98432 AATGCTTTTCATCATCATTCAAGAGTTCCCAATGAGAAAGATCCTTTGAAAGGTCAACTT 98491 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 ||||| | ||||| ||||| || || ||||| || ||||| | ||| |||||| |||| Sbjct 98492 CTTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATT 98551 Query 48703 GGATTGGGAAAATAACAAATCTATTTGGATTTT 48735 || || ||||| ||||| | ||||||||| Sbjct 98552 CAATGGGAAAAATGACAAAGCGTCTTGGATTTT 98584 Score = 111 bits (122), Expect = 2e-19 Identities = 158/220 (72%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 |||||||||| || |||||||| ||| ||||| | || ||||| || || | |||| Sbjct 94744 CTTCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTT 94803 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | | |||||| ||||| || || |||||||||||||| || ||||| || |||||||||| Sbjct 94804 TTAACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATG 94863 Query 48283 CGGTAAGTCTCTCTCCGTAACTGG-CTTC--GTTGTGTATCCACCGTTGTGCCCAATCAG 48339 | || | ||||| | ||| || | | |||||| | |||||| |||| Sbjct 94864 CAACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAG 94923 Query 48340 CCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379 | || | || || || || | ||| ||||| |||||||| Sbjct 94924 CTTTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 >seq8822 Length=1639 Score = 127 bits (140), Expect = 3e-24 Identities = 123/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437 || |||| |||| | | | ||||| |||||||| | ||| || || ||||| |||||| Sbjct 915 CTCGACAATTGAGGTTTAGGTGTTCCAGCATTAAAAAGTGTGGGTGAAGCATGAGTAAAC 974 Query 78438 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATT 78497 ||||||||||| | || || ||||||||||| || | || ||||| || ||| ||| Sbjct 975 CATTTTTCAGATAATAATTTATATGTTTCAATTGCAGCATCAATGTCTTCTTTATGTATT 1034 Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535 || || | ||| ||||||||||||||||| |||||||| Sbjct 1035 CCGACGGATACTCGCATCAACATATGCTGTGGTCTTTC 1072 >seq1105 Length=277015 Score = 122 bits (134), Expect = 1e-22 Identities = 126/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 76850 CCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATT 76909 |||||| || |||||||| ||||| | || |||| | || || || |||||||| || Sbjct 102656 CCATCCATAAAAATGCATACTTGTTAACTTTCCATAATTTGGTTCTGCAATATGAATGTT 102597 Query 76910 CATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTT 76969 | |||||||||||||| |||||||| || || || || ||||| || ||||||| || Sbjct 102596 TAAAGACTGACTTTGATCAATGAAAGCCCCCCTGTCTGCAGCCATCTTAATAATGGATTT 102537 Query 76970 TTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATC 77014 |||||| |||||||||| |||| | | | || ||| | ||||| Sbjct 102536 TTGAGGTATTTCCCAAACAGTTCTATACAGTTTTTTTAATTCATC 102492 Score = 109 bits (120), Expect = 8e-19 Identities = 146/202 (72%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 ||||| | ||||||| |||||| |||| | || |||||||||||||| |||| ||| Sbjct 91315 GATCCTTCATATGTTGAATAAGGACCTTTTTCTTTTGCTAGTTCACAACTTGCTTGTAAT 91256 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 | | |||||||||||||| || || | |||| | | ||||||| ||| ||| Sbjct 91255 GAACTATAATAAATTGTTTCAAATATTTGTATATTCAATTTCTGTGCTTTCTCACTGTCA 91196 Query 77475 AACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGT 77534 |||||||| | |||||| | ||| ||||| || ||||| ||||| || || || Sbjct 91195 AACGGATATCTCATTTTAATAAAAGTATCGGCTAAGCCTTGAACACCAATTCCTATGGGA 91136 Query 77535 CTATGTCTCTTATTGGA-AATT 77555 | ||| |||| ||| || |||| Sbjct 91135 CGATGCCTCTGATTAGATAATT 91114 Score = 105 bits (116), Expect = 9e-18 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 |||||||| || || || ||||| | ||||||||||| || || ||||| | ||| Sbjct 100932 TGAAATTCCCCCGATAAAACTCTTCTTACATAAATATTACTTGTGTAAGGTTCTATCGAT 100873 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || || | |||||| |||||||||||||| ||||| |||| || | |||||| Sbjct 100872 TCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTGGGCATTGGTGAAACGAGCAAACTA 100813 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 100812 TTTCTTACACCAT 100800 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 78739 CATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTA 78798 || ||||||| | | |||||||||||| || ||||| || | ||| |||| || |||| Sbjct 73872 CACCACTAAAGACTGATTTTGTTTCCTTATGAAGATTGGAAATAGCAATTCGAGCTGCTA 73813 Query 78799 GAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATAT 78858 ||||||||||||||||| ||| || || || || ||||||| ||||| ||| Sbjct 73812 ATGCAGCATAATCAGGATGTTTTGTTGTCATTGTTGCAGCAGTTTCTGCAACTAAATTAT 73753 Query 78859 CTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904 | | ||| ||| | | ||| ||| || |||| || |||||| Sbjct 73752 CAATCTCACATGTTTTTATTCCAGGATAAAGGCCTTCAACAACTTT 73707 >seq224 Length=538787 Score = 113 bits (124), Expect = 6e-20 Identities = 128/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 76848 CTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATA 76907 ||||| | || |||||||| || |||| || |||| ||||||| | || ||| Sbjct 7560 CTCCAACTATAAAAATGCATACTGGTCATCTTTCCATAATTAGGATCTTTAAAATATATA 7619 Query 76908 TTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTC 76967 | |||||||| |||||||| || ||||| |||||||| || |||||||| ||||| Sbjct 7620 CTGATCGACTGGCTTTGATCAATAAAAGCACCTCTATCTGCAGCCATTTTGATAATTACT 7679 Query 76968 TTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 ||||| || |||||||||| |||| | | | |||| | ||||||||||| Sbjct 7680 TTTTGGGGTATTTCCCAAACAGTTCTATATAAAAGTTTCAAATCATCTGGAA 7731 >seq546 Length=477121 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/125 (77%), Gaps = 3/125 (2%) Strand=Plus/Plus Query 43310 ACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAAATAAATATGTCTATTATCT 43369 ||||| ||||||| || ||||||||| || |||||||| | ||| | |||| ||||||| Sbjct 78787 ACCTGAGTTAGAGCTCTCCAATCCATATTTGCACTTCCAATATAGAAATGTTGATTATCT 78846 Query 43370 GATATCCAAAATTTAGTATGAAGAACTCCA---CCTAGAATATTTGCAATATCCACATAT 43426 ||||||||||||||| ||||| | |||| || |||| |||| || || | || | Sbjct 78847 ATTATCCAAAATTTAGTGTGAAGGATTCCACTTCCAAGAAGTTTTGTAAAATTGAGATTT 78906 Query 43427 CTCAC 43431 || || Sbjct 78907 CTTAC 78911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694577998104480