Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2640 136 9e-27 seq1218 107 4e-18 seq852 98.7 2e-15 >seq2640 Length=94256 Score = 136 bits (150), Expect = 9e-27 Identities = 164/222 (74%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || ||||| || |||||||| || ||||||||||| ||||||||||||| | || | Sbjct 13388 AGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGA 13447 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| | ||| ||||||||||| || | ||||| || | | |||||||||| Sbjct 13448 CCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCC 13507 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGA 152063 || || || |||||| |||||| | || | |||| |||| || ||||| || Sbjct 13508 TTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTC---ACTCGGTTCGACTTCCAGG 13564 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || ||||| ||||| ||||| | ||||||| Sbjct 13565 GTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCATT 13606 Score = 113 bits (124), Expect = 1e-19 Identities = 159/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || |||||||| || ||||||||||||||||||||||| | | || | Sbjct 12704 AGTCTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATCTGACAGTGTGCGA 12763 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || |||||||| ||| || |||||||| || | || || || | | || ||||| Sbjct 12764 CCGTCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGGTGGTATACCTTCT 12823 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGA 152063 || || ||||| || || ||| | || | |||| ||| ||| ||||| | | Sbjct 12824 TTGTCCTGAATCTTAGCCTTTACATTTTCGATAGTGTC---ACTGGGCTCCACTTCTAAA 12880 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || || || || |||||||||| ||||||| Sbjct 12881 GTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATCTGCATT 12922 Score = 89.7 bits (98), Expect = 1e-12 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || |||||||| || |||||||| | | || | || |||||||| ||| || Sbjct 12269 GTGGATTCTTTTTGAATATTGTAATCTGAAAGCGTGCGGCCGTCTTCTAGCTGTTTTCCC 12328 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || ||||| ||||||||||| | | || |||||||| ||||| || || ||| Sbjct 12329 GCAAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGTATCTTCGCCTTG 12388 Query 152028 ACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 || |||| | |||| ||| ||| ||||| || || || ||||| || || | Sbjct 12389 ACGTTCTCGATCGTGTC---ACTCGGCTCGACTTCCAGTGTTATTGTTTTACCAGTCAAT 12445 Query 152085 GTCTTCACGAAGACCTGCATT 152105 || |||||||| | |||||| Sbjct 12446 GTTTTCACGAATATTTGCATT 12466 >seq1218 Length=332501 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| ||||| || ||||| ||||||||||| || || |||||||| || | | || | Sbjct 113462 GAGCCTGAGAACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACG 113403 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | |||||| || | || || ||||| Sbjct 113402 ACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTC 113343 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||| ||| | || | | || | ||| || |||||||| Sbjct 113342 CTTATCCTGGATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGT 113283 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| ||||| || || | ||||| ||||||| |||||| Sbjct 113282 AATTGTTTTCCCAGTTAATGTCTTAACGAAGATCTGCAT 113244 Score = 96.9 bits (106), Expect = 8e-15 Identities = 155/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || || ||||| || || ||||| |||||||||||||| | || || | ||| Sbjct 114264 TCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCCGATAGGGTGCGCCC 114205 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| || ||| || || ||||| | | || ||||| | | || ||||| || Sbjct 114204 GTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTGGTCGGGAGGAATGCCTTCTTT 114145 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGT 152065 || |||||||| || ||| | || | ||| | ||| || ||||| | ||| Sbjct 114144 GTCCTGAATTTTAGCCTTAACATTTTCAA--TTGTAT-CACTGGGTTCAACTTCTAAAGT 114088 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||||||||||| || ||||| || || || | |||||| Sbjct 114087 AATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCATT 114048 >seq852 Length=358492 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | ||| || ||||| || || |||||||||||||| | ||||| | || Sbjct 357655 TCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGTGCGACC 357714 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 || |||| ||| ||||| || || | | ||||||||| | || |||||||||||| Sbjct 357715 GTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCTTCCTT 357774 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || ||||| || || | || | | || ||||| || | |||||| Sbjct 357775 ATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAAT 357834 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || | ||||||||||| | ||||||| Sbjct 357835 GGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCATT 357871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153666210728647