Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1427 127 2e-24 seq725 127 2e-24 seq546 82.4 8e-11 >seq1427 Length=229792 Score = 127 bits (140), Expect = 2e-24 Identities = 315/467 (67%), Gaps = 21/467 (4%) Strand=Plus/Plus Query 128443 AAGGTTTAGAGGGAGTTATCTTAAAATACCCAAATGAATTAT-ATATACCAGGTAAAAGA 128501 |||| ||||| ||| || | |||||| | ||| ||| | | ||| ||| || ||| || Sbjct 217834 AAGGATTAGAAGGACTTGTTTTAAAAGATCCAT-TGAGTACTTATAAACCTGGAAAACGA 217892 Query 128502 AAATGGTTAAAGGTAAAAAGGGATTATTTAAATAATGGATCAATGGCAGATTCTGCTGAT 128561 | ||| | || || |||| |||||| | || | || ||||| || ||| ||| Sbjct 217893 CATTGGCTGAAAGTCAAAAAAGATTATCTTCATGAGGGTAGCATGGCTGACAGTGCAGAT 217952 Query 128562 TTAGTTGTGTTGGGTGCATATTATGGTAAAGGTAAAAGATATGGAGGAATAAAATCTATA 128621 |||||||| || |||||||||| ||||| ||| || | || ||||| | || || Sbjct 217953 TTAGTTGTTTTAGGTGCATATTTTGGTACTGGT---AGTAAAGGTGGAATGATGTCAATT 218009 Query 128622 TTTCTTATGGGATGTTATGATAAAGAAACAGATACATGGAAAACTGTTAC-AAAATGC-- 128678 ||| | ||||| || | ||||| | | | | ||| || ||||| ||| | | Sbjct 218010 TTTTTAATGGGTTGCTTCGATAAGACATCCCAAAAGTGGTGTACAGTTACTAAAGTACAT 218069 Query 128679 TCAGGGTTTAATGATGAAACATTAAAAGAATTACAATC--AATT-GATATGATTAAAATT 128735 ||| || ||||| | ||| || |||||||| | |||| || ||| | ||| || Sbjct 218070 GGAGGACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTGAAAGTT 218129 Query 128736 AGTAAAAATAAAGATAAAATTCCAAATTGGTTAATTATTAACAGTATTCATTA--TCCGG 128793 | || | | |||| || || ||||||||| |||| | | || ||| ||| | Sbjct 218130 AACAATGACACAGAT---ATCCCTCATTGGTTAAACGTTAAAA--AATCTTTAATTCCAG 218184 Query 128794 ATTTTATTATCAAAGATCCAAAATCATCTCCTGTTTGGGAAATAATTGGATATGAATTTA 128853 ||||| || |||||||||||| |||| | || ||||| || ||| |||||| Sbjct 218185 ATTTTGTTTGTAAAGATCCAAAAACATCACAGGTATGGGAGATTGCAGGAGCAGAATTTT 218244 Query 128854 CAAAATCACCATCTCATACAGCGAATGGAATATCAATTAGGTTTCCT 128900 | ||| | | |||||||||| ||||||||||| ||||||||| Sbjct 218245 CTAAAGCTGAAGCTCATACAGC---AGGAATATCAATAAGGTTTCCT 218288 >seq725 Length=361488 Score = 127 bits (140), Expect = 2e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || || || ||||||||| ||||||||||| ||||| | || | |||| Sbjct 94744 CTTCATCTCTGCTGATTAATTCATTACTGAATGTTAATCCAGGCATAAGACCCCTCTTTT 94803 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | |||||| ||||| ||||| ||||| |||||||| || || || || |||||||| | Sbjct 94804 TTAACCAAAAAATTGCTGCAAACGATCCAGAAAAGAAGATTCCTTCGACTGCCGCAAATG 94863 Query 23651 CCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAG 23710 | |||| |||| |||||||| | | | |||| ||||| ||| ||| ||| | || Sbjct 94864 CAACAACACGTTCTCCAAATGTGGAAGTCAGATCATTTATCCAATTTATTGCCCAGTCAG 94923 Query 23711 CCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAA 23750 | || ||| || || | ||| || ||||| || || Sbjct 94924 CTTTTCTTTTGACGCAGGGTAATGTCTCTATTGCATTAAA 94963 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 23896 AAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAA 23955 |||||||| || || || ||||||||||||||||||||||| | |||| |||||| Sbjct 98374 AAATTTTCATTTACTATGCCATCACTAGCAGCAAAGAAAGCTAATACATGAGAAATAAAA 98433 Query 23956 TGTCTTTCATCAGTTGAT--AATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTT 24013 || |||||||| | || || || ||||| | || ||| ||||| | ||||||| Sbjct 98434 TGCTTTTCATCA--TCATTCAAGAGTTCCCAATGAGAAAGATCCTTTGAAAGGTCAACTT 98491 Query 24014 CATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTT 24073 | ||||| ||||| || || || ||| ||||| |||| |||||| || || Sbjct 98492 CTTCAACCGTCCAGAATGAAGCTTCAGCTTTCTTGTACATCTGCCAGATATCAGGATATT 98551 Query 24074 GTATTGGAAATATTACGAA 24092 || ||||| || || || Sbjct 98552 CAATGGGAAAAATGACAAA 98570 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821 |||| ||| ||| | ||||||||||||||||| | || ||||| || ||||||| || Sbjct 98130 TTTCATCAGGATCCGATATATATGTATCAATTAACAGGCTGTACATCTCTGAATGAACAT 98189 Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATC 23876 |||| || ||||||||||| ||||| || || | ||||| | | |||||| || Sbjct 98190 TTTCTATTGCAATCTGAAAGCCATAGAAGCAGCGTGCTTCGGTTACTTGAACTTC 98244 >seq546 Length=477121 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 139433 TCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGCTAACA 139492 |||| || || ||||||||||| | |||||| ||||| | |||||||||||||| || | Sbjct 78871 TCCTTCACACTAAATTTTGGATAATAGATAATCAACATTTCTATATTGGAAGTGCAAATA 78812 Query 139493 TGGACTGGCGATCACTAACTCAAGT 139517 |||| ||| || | |||||||| || Sbjct 78811 TGGATTGGAGAGCTCTAACTCAGGT 78787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521419834999800