Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2640 131 1e-25 seq1218 123 2e-23 seq852 109 4e-19 >seq2640 Length=94256 Score = 131 bits (144), Expect = 1e-25 Identities = 172/237 (73%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| |||||| ||||||| ||||||||||| |||||| ||| ||| || ||||| || Sbjct 12457 TATTTGCATTCCTCCTCTCAATCTCAACACCAAGTGAAGGGTGGACTCTTTCTGGATATT 12516 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | | ||| |||| || ||||||||||||||||| |||| | ||| || Sbjct 12517 GTAGTCCGACAACGTGCGTCCGTCTTCTAGCTGCTTCCCGGCAAATATCAGCCTCTGTTG 12576 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||||| ||| | ||||| || || ||| || ||| | || |||| ||||| Sbjct 12577 ATCTGGAGGAATGCCTTCTTTGTCTTGTATTTTTGCCTTTACGTTTTCTATAGTGTCACT 12636 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || | || || ||||| |||||||| || || || ||||| ||||| Sbjct 12637 CGGCTCTACTTCTAGAGTGATGGTCTTCCCCGTGAGTGTTTTTACAAAGATCTGCAT 12693 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||||| | |||||| ||||| || ||| ||||||||||||||||| Sbjct 12691 CATACCGCCACGAAGTCTGAGCACCAGATGAAGGGTCGACTCTTTTTGGATGTTGTAATC 12750 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| || ||||| || || || ||||||| ||| || ||||| | Sbjct 12751 TGACAGTGTGCGACCGTCTTCTAGCTGTTTACCCGCGAAGATCAGACGTTGTTGATCGGG 12810 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||| || ||| ||||| ||| | || | || ||||| || || Sbjct 12811 TGGTATACCTTCTTTGTCCTGAATCTTAGCCTTTACATTTTCGATAGTGTCACTGGGCTC 12870 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || | || || |||||||| || || || ||||||||||| ||||| Sbjct 12871 CACTTCTAAAGTGATGGTCTTTCCGGTAAGTGTTTTCACGAAGATCTGCAT 12921 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || || | |||||| ||||| || ||| ||||| ||||||||||| Sbjct 13375 CATTCCACCACGAAGCCTGAGCACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATC 13434 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || |||| || || ||||| ||||||| ||| |||||||| | Sbjct 13435 GGAAAGGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGG 13494 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| ||| || || ||| | || | || ||||| | ||| Sbjct 13495 AGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATTGTGTCACTCGGTTC 13554 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || ||||| || ||||||||||| ||||| || ||||| Sbjct 13555 GACTTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 120 bits (132), Expect = 2e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | |||||||| || || ||||| |||||||| || ||||| || ||||| Sbjct 13603 CATTCCTCCACGCAGTCTCAGTACGAGATGAAGTGTGCTCTCTTTCTGGATATTATAATC 13662 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || |||| |||| |||| ||||| || ||||||||||| | ||||||||| | Sbjct 13663 GGACAGAGTGCGCCCGTCTTCCAATTGCTTTCCAGCAAAGATCAATCTCTGCTGATCGGG 13722 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| || || || ||| | | |||| | || || || | || Sbjct 13723 TGGAATTCCCTCCTTGTCTTGGAT-TTTTGCCTTCACGTTCTCGATCGTATCACTTGGTT 13781 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 |||| |||| || || ||||| || || | || |||||||| || ||||| || Sbjct 13782 CCACTTCCAAAGTGATAGTCTTACCAGTCAACGTTTTCACGAATATCTGCATTAT 13836 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||||| ||| |||| ||| || || |||||||| ||||| ||||| Sbjct 13147 CATACCACCTCTCAGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATC 13206 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| || | || || | |||||| ||||||||||| | ||| |||||||| | Sbjct 13207 AGAGAGGGTACGACCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGG 13266 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || || ||| || ||| | || |||| ||||| | || Sbjct 13267 GGGAATGCCCTCTTTATCTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTC 13326 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || |||||||| ||||| || || || ||||| ||||| Sbjct 13327 TACTTCCAGAGTGATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 >seq1218 Length=332501 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | ||||| | || || || || || |||||| ||||| ||||| || Sbjct 113823 CATTCCACCACGGAGTCTGAGAACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTC 113764 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || |||||||| || |||||||| | |||||||||||| | Sbjct 113763 TGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGG 113704 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||||||||| || || || |||| | ||| |||| ||||| || | Sbjct 113703 TGGAATACCTTCCTTATCTTGGAT-TTTGGCTTTCACATTCTCTATCGTGTCACTGGGCT 113645 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||| ||| || ||||||||||| ||||||||||| || || ||||| Sbjct 113644 CTACCTCCAGCGTGATGGTCTTTCCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 Score = 100 bits (110), Expect = 2e-16 Identities = 165/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | || ||| | || |||||||||||| || || |||||||| Sbjct 114285 TATTTGCATACCACCACGCAATCTGAGAACGAGGTGAAGCGTGGATTCTTTCTGGATGTT 114226 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 |||||| | || |||| |||| ||||| || || || |||||||| ||||| || || Sbjct 114225 GTAATCCGATAGGGTGCGCCCGTCTTCCAGTTGTTTTCCCGCAAAGATTAAACGTTGTTG 114166 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 || | ||| | ||||| || ||| || || ||| | || | || || || Sbjct 114165 GTCGGGAGGAATGCCTTCTTTGTCCTGAATTTTAGCCTTAACATTTTCAATTGTATCACT 114106 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||| || || | ||||| || || || || || || || || || |||||||| Sbjct 114105 GGGTTCAACTTCTAAAGTAATAGTTTTGCCAGTCAGAGTTTTGACAAATATTTGCAT 114049 Score = 98.7 bits (108), Expect = 7e-16 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || |||||||| || | || || | || || |||||||| || ||||| Sbjct 113435 CTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCGAGCTGCTTGCCTGCAAA 113376 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | |||||||||||| | || | ||||||||| ||| ||||| |||| | Sbjct 113375 GATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGGATCTTAGTTTTCACATT 113316 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || || || | |||||||| | ||||| || || || || | ||||| || Sbjct 113315 TTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTCCCAGTTAATGTCTTAAC 113256 Query 44326 GAAGATTTGCATGAT--GTGAATGAA 44349 |||||| |||||||| |||||| || Sbjct 113255 GAAGATCTGCATGATGAGTGAATAAA 113230 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| ||||||||||| | || | || || || ||| || || || ||||| |||| Sbjct 114505 TTCCTCCTCTCAGTCTGAGAACTAAATGCAGGGTCGACTCTTTCTGAATATTGTAGTCGG 114446 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || |||| |||| ||||||||| |||||||||| | ||| || || | | Sbjct 114445 AAAGAGTACGACCGTCTTCCAACTGCTTCCCTGCAAAGATCAGTCTCTGTTGGTCGGGCG 114386 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | ||||| || ||| || || || | || |||| |||||| || || | Sbjct 114385 GAATGCCTTCTTTGTCCTGAATTTTAGCTTTTACATTTTCTATTGTGTCGCTGGGCTCTA 114326 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||| || || |||||||| ||||| || || || || |||||||| Sbjct 114325 CTTCCAGTGTTATAGTCTTTCCGGTGAGCGTTTTGACAAATATTTGCAT 114277 Score = 86.0 bits (94), Expect = 5e-12 Identities = 164/238 (69%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| |||||| || | || || | |||| ||||| || || || || ||||| Sbjct 114057 TATTTGCATTCCACCACGCAACCTAAGAACCAAATGAAGTGTCGATTCTTTCTGAATGTT 113998 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||||| | || || | || ||||||||||| || |||||||||| |||||| || Sbjct 113997 ATAATCTGACAGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGTTG 113938 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279 ||||| || | ||||| || ||| ||||| |||| | ||| |||| || || Sbjct 113937 ATCTGGTGGGATTCCTTCTTTATCCTGAATCTT-GGCTTTTACATTCTCTATAGTATCAC 113879 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || |||| ||||| ||||| || || | ||| || || || || ||||| Sbjct 113878 TTGGCTCAACTTCCAAGGTAATGGTCTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 >seq852 Length=358492 Score = 109 bits (120), Expect = 4e-19 Identities = 167/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | || ||| | ||||| || ||||| ||||| |||||||| Sbjct 357634 TATTTGCATCCCACCACGCAATCTAAGCACCAAATGGAGCGTAGATTCCTTCTGGATGTT 357693 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 |||||| | | ||| |||| || | ||| || |||||||| ||||| |||||||| Sbjct 357694 GTAATCTGACAAAGTGCGACCGTCCTCTAACTGTTTACCGGCAAAAATCAAGCGCTGCTG 357753 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 || | || | |||||||| ||| || || ||| | || | || || ||| Sbjct 357754 GTCAGGCGGGATTCCTTCCTTATCCTGGATTTTGGCCTTTACGTTTTCGATAGTATCGCT 357813 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| ||||||| ||||| || ||||| || | ||||||||||| || ||||| Sbjct 357814 TGGTTCTACCTCCAAAGTAATGGTTTTTCCAGTTAATGTCTTCACGAAAATCTGCAT 357870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359944521135969