Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2640 159 8e-34 seq852 138 3e-27 seq1218 127 5e-24 seq1332 93.3 1e-13 seq381 87.8 4e-12 >seq2640 Length=94256 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || |||||||| || || ||| ||| Sbjct 13602 CAGATTTTCGTCAAGACCCTCACCGGTAAGACCATCACCCTGGAAGTCGAACCGAGTGAC 13543 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||| || |||||||| |||||||||||||| || |||||| Sbjct 13542 ACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCCGATCAGCAA 13483 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| ||||| | |||||||| | || ||| ||||||| ||| | Sbjct 13482 CGTCTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCCTTTCCGATTACAACATT 13423 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 |||||||| || || || ||||| || Sbjct 13422 CAAAAAGAGTCGACCCTTCATCTGGT 13397 Score = 152 bits (168), Expect = 1e-31 Identities = 164/215 (76%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || |||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct 13146 CAGATTTTCGTAAAGACACTGACTGGAAAGACCATCACCCTGGAAGTGGA--GCCGAGTG 13089 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | ||||||||||| || ||| ||| || || |||||||||||||| ||||| || || | Sbjct 13088 ATACCATCGAGAATGTAAAAGCAAAAATCCAAGACAAAGAAGGAATTCCTCCTGATCAAC 13029 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | ||||||| || || |||||||| | |||||||| | ||||| | || |||||| Sbjct 13028 AGAGACTTATTTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTGTCGGACTATAACA 12969 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 | || |||||||| ||||| ||||| || ||||| Sbjct 12968 TTCAGAAAGAATCCACACTCCATCTAGTACTGAGA 12934 Score = 147 bits (162), Expect = 5e-30 Identities = 164/217 (76%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||||||||| || || ||||| || ||||| | || ||||| || ||| Sbjct 12918 CAGATCTTCGTGAAAACACTTACCGGAAAGACCATCACTTTAGAAGTGGA--GCCCAGTG 12861 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| ||||| || || || |||||||||||||||||||| || || || || || | Sbjct 12860 ACACTATCGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGTATACCACCCGATCAAC 12801 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 |||| || |||||||| || |||||||| ||||| || | || || | ||||| ||| Sbjct 12800 AACGTCTGATCTTCGCGGGTAAACAGCTAGAAGACGGTCGCACACTGTCAGATTACAACA 12741 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 |||||||||| || || || ||||| || | ||||| Sbjct 12740 TCCAAAAAGAGTCGACCCTTCATCTGGTGCTCAGACT 12704 Score = 141 bits (156), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| ||||||||||| | || || ||||| || || || || || || || || Sbjct 12462 CAAATATTCGTGAAAACATTGACTGGTAAAACAATAACACTGGAAGTCGA--GCCGAGTG 12405 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| |||||||||||||| ||||| || ||||| ||||| || ||||| ||||||| Sbjct 12404 ACACGATCGAGAACGTCAAGGCGAAGATACAAGACAAGGAAGGTATTCCTCCAGACCAGC 12345 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | ||||||| || || ||||||||||| ||||| || | || ||| | ||||| || Sbjct 12344 AGAGACTTATTTTTGCGGGAAAACAGCTAGAAGACGGCCGCACGCTTTCAGATTACAATA 12285 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | ||||||||||| || | || | ||| || | |||||| Sbjct 12284 TTCAAAAAGAATCCACCTTACACTTGGTTCTGCGTCTCAGA 12244 Score = 141 bits (156), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || || || ||||||||||| ||||| || ||||| || || || | ||| | | Sbjct 13374 CAGATCTTTGTTAAAACTCTCACCGGAAAGACCATCACTCTGGAAGT--AGAGCCGAGTG 13317 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| || || |||||||| ||| || || || ||||| || || || || || |||| Sbjct 13316 ACACTATAGAAAACGTCAAGGCAAAAATACAAGATAAAGAGGGCATTCCCCCTGATCAGC 13257 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 |||| |||||||| |||||||| ||| | |||||||| | || || | ||||||||| Sbjct 13256 AACGTCTTATCTTTGCCGGAAAGCAGTTAGAAGATGGTCGTACCCTCTCTGATTATAACA 13197 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | ||||| ||||| || ||||| | || ||| |||| ||| Sbjct 13196 TTCAAAAGGAATCGACTCTGCACTTGGTATTGCGACTGAGA 13156 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| | || || || || ||||| | || |||||| || Sbjct 13830 CAGATATTCGTGAAAACGTTGACTGGTAAGACTATCACTTTGGAAGTGGAACCAAGTGAT 13771 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || ||| || || ||||| || ||||| || || || ||||| Sbjct 13770 ACGATCGAGAACGTGAAGGCAAAAATCCAAGACAAGGAGGGAATTCCACCCGATCAGCAG 13711 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| || | ||||| || | ||||| |||||||||| || Sbjct 13710 AGATTGATCTTTGCTGGAAAGCAATTGGAAGACGGGCGCACTCTGTCCGATTATAATATC 13651 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || ||||| ||||| ||||| || ||||||| Sbjct 13650 CAGAAAGAGAGCACACTTCATCTCGTACTGAGACT 13616 Score = 96.9 bits (106), Expect = 8e-15 Identities = 155/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || || ||||| ||||| || || || ||||| || || || || || || Sbjct 12690 CAGATCTTTGTAAAAACACTCACGGGGAAGACCATCACTCTAGAAGTAGA--GCCGAGTG 12633 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| || || ||||| || ||| || || ||||||||||| || ||||| || || | Sbjct 12632 ACACTATAGAAAACGTAAAGGCAAAAATACAAGACAAAGAAGGCATTCCTCCAGATCAAC 12573 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || || || ||||| || ||||| ||||| ||| | || | | || || || Sbjct 12572 AGAGGCTGATATTTGCCGGGAAGCAGCTAGAAGACGGACGCACGTTGTCGGACTACAATA 12513 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || || || | || |||||| | ||| Sbjct 12512 TCCAGAAAGAGTCCACCCTTCACTTGGTGTTGAGATTGAGA 12472 >seq852 Length=358492 Score = 138 bits (152), Expect = 3e-27 Identities = 163/219 (74%), Gaps = 9/219 (4%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA- 177973 ||||||| | |||||||| |||||||| || || || || || || | ||||| || Sbjct 358101 AAAATGC---AGATTTTCGTTAAAACTCTAACTGGGAAGACTATTACTTTGGAGGTAGAG 358045 Query 177974 --AAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031 |||| ||||| |||||||| || ||| ||||||||| ||||||||||| || || Sbjct 358044 CCAAGC---GACACAATCGAGAATGTAAAAGCAAAGATTCAAGACAAAGAAGGCATTCCG 357988 Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091 || ||||| || | | || ||||||||||| || |||||||| || | ||| | | Sbjct 357987 CCCGACCAACAGAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTCGCACTTTGTCT 357928 Query 178092 GATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 ||||||||| | || |||||||| || || ||| | ||| Sbjct 357927 GATTATAACATTCAGAAAGAATCTACCCTTCATTTGGTT 357889 Score = 127 bits (140), Expect = 5e-24 Identities = 152/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||||||||| || |||||||| || || | || || ||| | || Sbjct 357639 CAAATATTTGTGAAAACTCTTACTGGAAAAACCATTACGTTGGAAGTTGAACCCAGTGAT 357580 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||||||| ||||||||||| || || || || || || Sbjct 357579 ACCATAGAAAACGTCAAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAACAG 357520 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || |||||||| || | |||||||| | || | |||||||||| | Sbjct 357519 AGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAATATT 357460 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||||||||| || || || |||| Sbjct 357459 CAAAAAGAATCTACGCTTCA-CTTG 357436 Score = 107 bits (118), Expect = 5e-18 Identities = 147/204 (72%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || ||||||||||| || | || |||||||| || || | ||||| ||| ||| Sbjct 357867 CAGATTTTCGTGAAGACATTAACTGGAAAAACCATTACTTTGGAGGTAGAACCAAGC--- 357811 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || || ||||| ||||| || || || ||||| || ||||||||||| || |||||| Sbjct 357810 GATACTATCGAAAACGTAAAGGCCAAAATCCAGGATAAGGAAGGAATCCCGCCTGACCAG 357751 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | || || ||||| |||||| | || || || | ||| | | ||||| ||| Sbjct 357750 CAGCGCTTGATTTTTGCCGGTAAACAGTTAGAGGACGGTCGCACTTTGTCAGATTACAAC 357691 Query 178101 GTCCAAAAAGAATCAACACTGCAT 178124 |||| || ||||| || || ||| Sbjct 357690 ATCCAGAAGGAATCTACGCTCCAT 357667 >seq1218 Length=332501 Score = 127 bits (140), Expect = 5e-24 Identities = 162/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| || || ||||| ||||| ||||| || || || || || || || || ||| Sbjct 114280 CAAATATTTGTCAAAACGCTCACCGGAAAGACTATAACACTGGAAGTAGA--GCCCAGCG 114337 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| || || || || ||| || ||||||||||||||||| || || || ||||| | Sbjct 114338 ACACAATAGAAAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCCGACCAAC 114397 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | |||| ||||| || || || ||| | ||||| || | |||||| |||| || || Sbjct 114398 AGAGACTGATCTTTGCAGGGAAGCAGTTGGAAGACGGTCGTACTCTTTCCGACTACAATA 114457 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | || ||||| || || |||||| | ||| | ||||| ||| Sbjct 114458 TTCAGAAAGAGTCGACCCTGCATTTAGTTCTCAGACTGAGA 114498 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||||| || || ||||| || || | || || ||| | || Sbjct 114052 CAAATATTTGTCAAAACTCTGACTGGCAAAACTATTACTTTAGAAGTTGAACCCAGTGAT 114111 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || ||||||||||||||||| || ||||| ||||| ||| Sbjct 114112 ACAATTGAAAATGTTAAGGCTAAAATTCAGGACAAAGAAGGCATTCCTCCCGACCAACAA 114171 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || |||||||| || ||||| || | || || | ||||| ||| || Sbjct 114172 CGTTTAATCTTTGCGGGAAAACAACTGGAAGACGGGCGCACCCTATCGGATTACAACATC 114231 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 || |||||||| || || || || ||| | ||| Sbjct 114232 CAGAAAGAATCCACGCTTCACCTCGTTCTCAGA 114264 Score = 114 bits (126), Expect = 3e-20 Identities = 152/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || || ||||| | || || || || || ||| | || || || || || Sbjct 113824 CAGATATTTGTTAAAACCTTGACTGGCAAGACCATTACCTTGGAAGTTGA--GCCAAGTG 113881 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | || || ||||| || ||| ||||||||||| |||||||||||||| || || || | Sbjct 113882 ATACTATAGAGAATGTAAAAGCCAAGATTCAGGATAAAGAAGGAATCCCACCAGATCAAC 113941 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||| || || || ||||| |||||||| | || || | ||||||||| Sbjct 113942 AGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACCCTGTCAGATTATAACA 114001 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTT 178130 | || |||||||| ||||| ||| | ||| Sbjct 114002 TTCAGAAAGAATCGACACTTCATTTGGTT 114030 >seq1332 Length=188647 Score = 93.3 bits (102), Expect = 1e-13 Identities = 112/151 (74%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| || ||||| | ||||||||| ||||||||||| || || || || || Sbjct 169319 GACACCATAGAAAACGTATAGGCAAAGATTCAAGACAAAGAAGGTATACCGCCCGATCAA 169260 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | || || |||||||| || | |||||||| | || | |||||||||| Sbjct 169259 CAGAGATTAATTTTTGCCGGAAAGCAATTAGAAGATGGTCGCACCTTATCCGATTATAAT 169200 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 | |||||||||| ||||| || |||| || Sbjct 169199 ATTAAAAAAGAATCTACACTTCA-CTTGGTT 169170 >seq381 Length=560238 Score = 87.8 bits (96), Expect = 4e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| |||||||| || |||||||| | || || || |||||||| | ||||||||| | Sbjct 529323 AGGTATCCCTCCTGATCAGCAACGTTTAATTTTTGCTGGAAAACAATTAGAAGATGGACG 529264 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || | | ||||||||| | ||||| ||||| || | ||||||||||| ||| | || Sbjct 529263 TACATTGTCTGATTATAACATTCAAAAGGAATCCACTTTACATCTTGTTTTAAGATTAAG 529204 Query 178142 A 178142 | Sbjct 529203 A 529203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203569923717658