Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Centruroides_20sculpturatus_20[genbank_20GCA_5F000671375.1_202014- 05-05] 10,457 sequences; 926,399,729 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq852 116 3e-21 seq1218 111 1e-19 seq2640 107 2e-18 >seq852 Length=358492 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||| || || || |||||||||||||| || || | ||||| |||| ||| Sbjct 357890 ACCAAATGAAGGGTAGATTCTTTCTGAATGTTATAATCAGACAAAGTGCGACCGTCTTCG 357949 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||| |||||||| |||| | ||||||||| | |||| || || |||| | || Sbjct 357950 AGTTGCTTTCCGGCGAAAATCAACCTCTGTTGGTCGGGCGGAATGCCTTCTTTGT-CTTG 358008 Query 41774 ATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | | ||||||| || | | |||||||| | ||| ||||||| || || || || Sbjct 358009 AATCTTTGCTTTTACATTCTCGATTGTGTCGCTTGGCTCTACCTCCAAAGTAATAGTCTT 358068 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || || |||||||||||||| || Sbjct 358069 CCCAGTTAGAGTTTTAACGAAAATCTGCATTTT 358101 Score = 102 bits (112), Expect = 8e-17 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| ||| ||||| |||||||| ||||| || || || | ||||| |||| || Sbjct 357661 CACCAAATGGAGCGTAGATTCCTTCTGGATGTTGTAATCTGACAAAGTGCGACCGTCCTC 357720 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG-CGGGAACGCTCTCCTTGTCCA 41771 | ||| || ||||| || |||| |||||| ||||| | ||||| || ||||| ||| Sbjct 357721 TAACTGTTTACCGGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATTCCT-TCCTTATCCT 357779 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 |||||| ||| | || | | ||| ||||| | || ||||||| || || ||| Sbjct 357780 GGATTTTGGCCTTTA-CGTTTTCGATAGTATCGCTTGGTTCTACCTCCAAAGTAATGGTT 357838 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || | ||||| |||||||||||||| Sbjct 357839 TTTCCAGTTAATGTCTTCACGAAAATCTGCAT 357870 >seq1218 Length=332501 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||| || || ||||| || |||||||| | || || Sbjct 113801 ACGAGATGGAGGGTCGACTCCTTCTGGATATTGTAGTCTGACAGGGTGCGGCCATCCTCA 113742 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || ||||| || || | |||| | ||||| || | Sbjct 113741 AGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGG 113682 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| |||| | | ||||| || | ||| ||||||| ||| || || || Sbjct 113681 ATTTTGGCTTTCACATTCTCTATCGTGTCACTGGGCTCTACCTCCAGCGTGATGGTCTTT 113622 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| ||||| || ||||||||||| Sbjct 113621 CCCGTCAGGGTCTTCACAAAAATCTGCAT 113593 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||||||||| ||||| || ||||| || | || ||| Sbjct 113452 ACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAGGGTACGACCATCCTCG 113393 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || ||||| || || | |||| | ||||| ||| | Sbjct 113392 AGCTGCTTGCCTGCAAAGATGAGACGCTGCTGATCGGGCGGAATACCTTCCTTATCCTGG 113333 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || |||| | || || || | ||||||||| | || || ||||| Sbjct 113332 ATCTTAGTTTTCACATTTTCAATTGTATCACTAGGCTCCACCTCAAGAGTAATTGTTTTC 113273 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || | ||||| ||||| ||||||||| Sbjct 113272 CCAGTTAATGTCTTAACGAAGATCTGCATG 113243 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||| || || || |||||||||||||| || || ||||| || | || || Sbjct 114029 ACCAAATGAAGTGTCGATTCTTTCTGAATGTTATAATCTGACAGGGTTCGGCCATCTTCC 113970 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| |||||||| || | || | | || || ||| || Sbjct 113969 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGATCTGGTGGGATTCCTTCTTTATCC-TG 113911 Query 41774 ATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | | || |||| || | | ||| || || | ||| || |||| || || || || Sbjct 113910 AATCTTGGCTTTTACATTCTCTATAGTATCACTTGGCTCAACTTCCAAGGTAATGGTCTT 113851 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| || || || || |||||||| Sbjct 113850 GCCAGTCAAGGTTTTAACAAATATCTGCAT 113821 >seq2640 Length=94256 Score = 107 bits (118), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||||||| || || ||| || |||||||| || ||||| |||||||| | || || Sbjct 13396 CACCAGATGAAGGGTCGACTCTTTTTGAATGTTGTAATCGGAAAGGGTGCGACCATCTTC 13455 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 | || || |||||||| ||||| || || || || | || | | ||||||||| Sbjct 13456 CAATTGTTTACCGGCGAAGATCAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCCTG 13515 Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||||||| ||| || ||| ||||| |||| || || |||| || || || Sbjct 13516 GATTTTTGCCTTGACATTTTCGATT--GTGTCACTCGGTTCGACTTCCAGGGTGATGGTC 13573 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || ||||| |||||||||||||| Sbjct 13574 TTACCGGTGAGGGTCTTGACGAAAATCTGCAT 13605 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || || |||| ||||| || ||||| ||||||||||| || |||||||| || Sbjct 13160 AGTCGCAATACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCAGAGAGGGTACGA 13219 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || | |||||| ||||| || || || || || || || | ||||| || ||| Sbjct 13220 CCATCTTCTAACTGCTTTCCGGCAAAGATAAGACGTTGCTGATCAGGGGGAATGCCCTCT 13279 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 || | | || ||||||| | ||| | | |||||| |||| ||| || |||| || Sbjct 13280 TTAT-CTTGTATTTTTGCCTTGACGTTTTCTATAGTGTCACTCGGCTCTACTTCCAGAGT 13338 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || || || || || |||||||| Sbjct 13339 GATGGTCTTTCCGGTGAGAGTTTTAACAAAGATCTGCAT 13377 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| || ||||||||||||||||| || || || || | || || Sbjct 12941 ACTAGATGGAGTGTGGATTCTTTCTGAATGTTATAGTCCGACAGAGTACGACCATCTTCT 13000 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 | || || || || || || || | |||||| || | |||| | || ||||| | Sbjct 13001 AATTGTTTTCCAGCAAAAATAAGTCTCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGG 13060 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 |||||| |||| || | | || || |||| |||||| |||| || || || || Sbjct 13061 ATTTTT-GCTTTTACATTCTCGATGGTATCACTCGGCTCCACTTCCAGGGTGATGGTCTT 13119 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| |||||||||||||||||||| Sbjct 13120 TCCAGTCAGTGTCTTTACGAAAATCTGCAT 13149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462243571088400