Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq211 107 2e-18 >seq211 Length=255845 Score = 107 bits (118), Expect = 2e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 16496 TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCC 16555 |||||||||||||||| || || || ||||| ||||| ||||||||||| || || ||| Sbjct 251952 TACATTTCTGAGTGTACATTTTCAATTGCTATTTGAAAACCATAGAAGCACCGTGCTTCC 251893 Query 16556 GCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTT 16615 | || ||| ||||| || ||||| | || |||||||| || ||||| || | Sbjct 251892 GTTACTTGGACTTCTTGACTGAACCGTTCTACTAGATTCTCATTGACAATACCATCTGAT 251833 Query 16616 GCAGCAAAAAACGCCAATA 16634 || |||||||||||||||| Sbjct 251832 GCTGCAAAAAACGCCAATA 251814 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTA-AGTCGCAATTAATTCCTATAAGTC 16091 |||||| || || |||| || || |||||||| | ||| |||||| ||||| || | | Sbjct 252488 TCTATCGGCGACGTATTCGATGTACTGACACATGAGAGT-GCAATTCATTCCAATCATTT 252430 Query 16092 GTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATAT 16151 | || ||||| ||| || | |||| || ||| || | || || || || || || Sbjct 252429 GGACTGGAAGTGCTACCGTGAGGAATTCTTTTTCAATTTCCACAGCATCCTTGATAATGG 252370 Query 16152 CGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGT 16211 | | ||||| | ||| ||| | || | | |||||| ||||||||||| ||||| | Sbjct 252369 AGATAACTCGTTCCTGAGAAGGTTTCTGTATAATGTGTTTGAACATTAGACAAGCGAATT 252310 Query 16212 CGCAATGTAGTCC 16224 |||| || ||||| Sbjct 252309 CGCAGTGAAGTCC 252297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511401768064320