Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq502 86.0 5e-12 >seq502 Length=146425 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18614 ATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATG 18673 |||||| | || || ||||||||||| |||||||| | || ||||| || || ||||| Sbjct 100167 ATTTCCATTGTTGACGACAAAGCGTGTCTTTTGGAGAGGGGTTGTGGAGGAATTATTATG 100108 Query 18674 GTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGA 18733 ||||||| | || || || || | |||||||| | ||||| | | || || ||||| Sbjct 100107 GTTTATCAGAGGATCGACTAATGCTAAAGAACTGTCAAGTAAAGGTGTTCATATTTGGGA 100048 Query 18734 TATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGA 18793 | | | | || | ||||||||||| ||||| || | || | || || Sbjct 100047 TGCAAATAGTTCACGTGAATTTCTAAATTCCTGTGGCTATGATGACAGGGAGGAAGGTGA 99988 Query 18794 CCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATA 18843 || || || |||| || || || ||| || ||||||| || | |||| Sbjct 99987 TCTCGGTCCTGTTTATGGATTTCAATGGCGAAATTTTGGTGCACAGTATA 99938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399494378944920