Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq502 132 3e-26 >seq502 Length=146425 Score = 132 bits (146), Expect = 3e-26 Identities = 155/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||||||||| || | ||| |||| | | ||| || |||||| |||||||||||||| Sbjct 99590 AGTGACATGTGCCAGCATATAAGTAAGCAAAGAGTACGAAGCAATATTAAATGGCACTCC 99649 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 || ||||||||||| ||||||||| |||||||| || | | ||||| || || || Sbjct 99650 TAGTCCCATATCAGCACTTCTTTGATAGAGTTGACACGACAATTCTCCATTACTAACGTA 99709 Query 101872 AAATTG-ACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTC 101929 |||||| || | ||| ||||| || |||| ||||||| ||||| ||| |||| Sbjct 99710 AAATTGTAC--GAGACAGTGACATGGAGGCAGTGCCATTTTTGGAATATCTATTGGATTC 99767 Query 101930 CAAGCACACATTAACATCCTTCTATC 101955 || ||| ||||||| |||||||| || Sbjct 99768 CATGCAGACATTAAAATCCTTCTGTC 99793 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 102036 TATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCAT 102095 |||| | ||| || |||| | ||| ||||||||||| ||||| || ||||| ||||| | Sbjct 99938 TATACTGTGCACCAAAATTTCGCCATTGAAATCCATAAACAGGACCGAGATCACCTTCCT 99997 Query 102096 CTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGT 102155 | ||||||| | | ||| || || |||| | || | ||| ||||||||||| | Sbjct 99998 CCCTGTCATCATAGCCACAGGAATTTAGAAATTCACGTGAACTATTTGCATCCCAAATAT 100057 Query 102156 GCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTT 102215 | || || ||| || ||||| | ||| ||||||||||||||||| || | || Sbjct 100058 GAACACCTTTACTTGACAGTTCTTTAGCATTAGTCGATCCTCTGATAAACCATAATAATT 100117 Query 102216 CTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265 | || ||||| ||||||||||| || | ||| || || || | ||||||| Sbjct 100118 CCTCCACAACCCCTCTCCAAAAGACACGCTTTGTCGTCAACAATGGAAAT 100167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361242500167976