Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq502 132 3e-26 >seq502 Length=146425 Score = 132 bits (146), Expect = 3e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 97111 AAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGC 97170 ||| |||||||||| || | |||| |||| | | ||| || |||||| ||||| ||| Sbjct 99585 AAACCAGTGACATGTGCCAGCATATAAGTAAGCAAAGAGTACGAAGCAATATTAAATGGC 99644 Query 97171 ACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACAC 97230 || ||||||||||||||||| ||||||||| | ||||| || | | ||||| || Sbjct 99645 ACTCCTAGTCCCATATCAGCACTTCTTTGATAGAGTTGACACGACAATTCTCCATTACTA 99704 Query 97231 ACATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC 97289 || ||||| || | | ||| ||||| || |||| ||||||||||||| ||||| Sbjct 99705 ACGTAAAATTG-TACGAGACAGTGACATGGAGGCAGTGCCATTTTTGGAATATCTATTGG 99763 Query 97290 ATTCCAAGCACACATCAACATTCTTCTATC 97319 |||||| ||| |||| || || ||||| || Sbjct 99764 ATTCCATGCAGACATTAAAATCCTTCTGTC 99793 Score = 122 bits (134), Expect = 6e-23 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 97401 ATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTC 97460 ||| | ||| ||||||| | |||||| |||||||||||||| || || || ||||| || Sbjct 99939 ATACTGTGCACCAAAATTTCGCCATTGAAATCCATAAACAGGACCGAGATCACCTTCCTC 99998 Query 97461 TCTATCA-CAGAAAC-CAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATG 97518 || ||| || | | || | | | |||| || | || | ||||||||||||||| Sbjct 99999 CCTGTCATCATAGCCACAGGAATTTAGAAATTC-ACGT-GAACTATTTGCATCCCAAATA 100056 Query 97519 TGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAAT 97578 || ||||| || || ||||| | ||| ||||||||||||||||| || ||| Sbjct 100057 TGAACACCTTTACTTGACAGTTCTTTAGCATTAGTCGATCCTCTGATAAACCATAATAAT 100116 Query 97579 TCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 || |||||||| ||||||||||| || | ||| || || || | ||||| Sbjct 100117 TCCTCCACAACCCCTCTCCAAAAGACACGCTTTGTCGTCAACAATGGAAA 100166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346775648574320