Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq502 156 6e-33 seq188 149 9e-31 seq255 127 3e-24 seq236 105 1e-17 seq1536 100 4e-16 >seq502 Length=146425 Score = 156 bits (172), Expect = 6e-33 Identities = 191/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 205699 CCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGA 205758 ||||| || ||||| || | |||||| ||||| | |||||||||| ||||||||| Sbjct 99907 CCTTGCCCTGAATAATCAGTGTTCATATCGATATACTGTGCACCAAAATTTCGCCATTGA 99966 Query 205759 AAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttata 205818 || |||||||| ||||| | ||||||||| | || |||| | | |||| |||| | Sbjct 99967 AATCCATAAACAGGACCGAGATCACCTTCCTCCCTGTCATCATAGCCACAGGAATTTAGA 100026 Query 205819 tattttaatgatccattttcatcccaaatatggattcctttattttttaGAATATTTGTA 205878 ||| ||| | |||| ||||||||||||| | |||||| || || || | | Sbjct 100027 AATTCACGTGAACTATTTGCATCCCAAATATGAACACCTTTACTTGACAGTTCTTTAGCA 100086 Query 205879 TTAGTTGATCCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGAT 205938 ||||| ||||| ||||||||||||||||| || |||| ||||||||||| | Sbjct 100087 TTAGTCGATCCTCTGATAAACCATAATAATTCCTCCACAACCCCTCTCCAAAAGACACGC 100146 Query 205939 TTTGTTGTAAATAATGGAAAT 205959 ||||| || || ||||||||| Sbjct 100147 TTTGTCGTCAACAATGGAAAT 100167 Score = 100 bits (110), Expect = 4e-16 Identities = 139/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 205435 TTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAAT 205494 || ||| ||| | |||||| | ||||||||| | ||| || ||||| ||||||| Sbjct 99582 TTCAAACCAGTGACATGTGCCAGCATATAAGTAAGCAAAGAGTACGAAGCAATATTAAAT 99641 Query 205495 GGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTA 205554 || || |||| ||||||||||| ||||||||| | |||||| | | ||| | Sbjct 99642 GGCACTCCTAGTCCCATATCAGCACTTCTTTGATAGAGTTGACACGACA---ATTCTCCA 99698 Query 205555 TTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCT 205614 ||| | || | ||||||||| | ||| ||||| || || | |||| ||| || |||| Sbjct 99699 TTACTAACGTAAAATTGTACGAGACAGTGACATGGAGGCAGTGCCATTTTTGGAATATCT 99758 Query 205615 ATAGGATTCCAGGC 205628 || |||||||| || Sbjct 99759 ATTGGATTCCATGC 99772 >seq188 Length=1630868 Score = 149 bits (164), Expect = 9e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | ||||| || ||||| || || || || | || ||||||| Sbjct 123647 AATGCAGATATTCGTCAAGACTCTTACAGGAAAGACCATCACCCTTGAAGTTGAAGCCTC 123706 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct 123707 AGACACGATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCACCAGATCA 123766 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || ||||| |||||||| | |||||| | ||||||||| || ||||| Sbjct 123767 GCAGAGGTTGATCTTTGCTGGAAAACAGCTTGAGGATGGCCGAACATTATCTGACTATAA 123826 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGT 124747 |||||| |||||||| ||| | |||||||| Sbjct 123827 TATTCAGAAAGAATCTACTCTTCATTTGGT 123856 Score = 145 bits (160), Expect = 1e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | ||||| || ||||| || || || || | || ||||||| Sbjct 124103 AATGCAGATATTCGTCAAGACTCTTACAGGAAAGACCATCACCCTTGAAGTTGAAGCCTC 124162 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct 124163 AGACACGATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCACCAGATCA 124222 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || ||||| |||||||| | |||||| | ||||||||| || || || Sbjct 124223 GCAGAGGTTGATCTTTGCTGGAAAACAGCTTGAGGATGGCCGAACATTATCTGACTACAA 124282 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGT 124747 |||||| |||||||| ||| | |||||||| Sbjct 124283 TATTCAGAAAGAATCTACTCTTCATTTGGT 124312 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | ||||| || ||||| || || || || | || ||||||| Sbjct 122963 AATGCAGATATTCGTCAAGACTCTTACAGGAAAGACCATCACCCTTGAAGTTGAAGCCTC 123022 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct 123023 AGACACGATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCACCAGATCA 123082 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || ||||| ||||| ||| | || ||| | || || | ||||| || Sbjct 123083 GCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTTCTGATTACAA 123142 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | ||| |||| | ||| | || ||||| || Sbjct 123143 CATTCAGAAGGAATCCACCCTTCATCTGGTACTCCGTCTCCGTGGTGGAAT 123193 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | ||||| || ||||| || || || || | || ||||||| Sbjct 123191 AATGCAGATATTCGTCAAGACTCTTACAGGAAAGACCATCACCCTTGAAGTTGAAGCCTC 123250 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct 123251 AGACACGATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCACCAGATCA 123310 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || ||||| ||||| ||| | || ||| | || || | ||||| || Sbjct 123311 GCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTTCTGATTACAA 123370 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | ||| |||| | ||| | || ||||| || Sbjct 123371 CATTCAGAAGGAATCCACCCTTCATCTGGTACTCCGTCTCCGTGGTGGAAT 123421 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | ||||| || ||||| || || || || | || ||||||| Sbjct 123419 AATGCAGATATTCGTCAAGACTCTTACAGGAAAGACCATCACCCTTGAAGTTGAAGCCTC 123478 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct 123479 AGACACGATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCACCAGATCA 123538 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || ||||| ||||| ||| | || ||| | || || | ||||| || Sbjct 123539 GCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTTCTGATTACAA 123598 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | ||| |||| | ||| | || ||||| || Sbjct 123599 CATTCAGAAGGAATCCACCCTTCATCTGGTACTCCGTCTCCGTGGTGGAAT 123649 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| | || || || || || || | ||| |||| ||| | Sbjct 122736 ATGCAGATTTTCGTGAAGACTTTGACTGGGAAGACCATCACCCTTGAGGTTGAGGCATCT 122795 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct 122796 GATACGATTGAAAATGTAAAAGCCAAAATTCAAGATAAGGAAGGAATCCCACCAGATCAG 122855 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | || ||||| ||||| ||| | || ||| | || || | ||||| || Sbjct 122856 CAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTTCTGATTACAAC 122915 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | ||| |||| | ||| | || ||||| || Sbjct 122916 ATTCAGAAGGAATCCACCCTTCATCTGGTACTCCGTCTCCGTGGTGGAAT 122965 Score = 102 bits (112), Expect = 1e-16 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || |||| || ||||| || || | || |||| || Sbjct 124331 AATGCAGATCTTTGTTAAAACGTTAACTGGTAAAACGATCACCCTTGAAGTTGAGGCGTC 124390 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || ||| | || ||||||||||| ||||| || || ||||| || || Sbjct 124391 TGACACGATAGAAAATGTGAAGGCTAAAATTCAAGACAAAGAGGGAATCCCACCAGACCA 124450 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | |||||||| ||||| ||| | || ||| | || || | ||| || || Sbjct 124451 GCAGAGGTTGATTTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTCTCAGACTACAA 124510 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 ||| ||||||||||||||| | || || ||| Sbjct 124511 TATCCAAAAAGAATCAACTCTTCACTTAGTT 124541 Score = 93.3 bits (102), Expect = 6e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || |||| |||||||| || || | || |||| ||| Sbjct 123875 AATGCAGATCTTTGTTAAAACGTTAACTGGCAAAACGATCACCCTTGAAGTTGAGGCATC 123934 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || ||| | || ||||||||||| |||||||| || ||||| || || Sbjct 123935 CGACACGATAGAAAATGTGAAGGCTAAAATTCAAGACAAAGAAGGAATCCCACCAGACCA 123994 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || ||||| ||||| ||| | || || | || || | ||||| || Sbjct 123995 GCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGACGGCCGCACTCTTTCTGATTACAA 124054 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | ||| |||| | ||| | || ||||| || Sbjct 124055 CATTCAGAAGGAATCCACCCTTCATCTGGTACTCCGTCTCCGTGGTGGAAT 124105 >seq255 Length=939575 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || || |||||||| ||| | || ||||||| Sbjct 828224 ATGCAGATCTTCGTGAAGACTCTCACTGGGAAAACTATCACTCTGGAAGTTGAAGCTTCG 828283 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| |||||||| || |||||||| || || ||||||||| Sbjct 828284 GATACGATTGAAAATGTCAAAGCTAAAATTCAGGACAAAGAAGGCATCCCCCCTGATCAA 828343 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || ||||| || || ||||| | ||||| | | || | ||||||||| Sbjct 828344 CAACGTCTAATTTTCGCCGGCAAACAGCTGGAGGACGGAAGGACGCTTTCTGATTATAAT 828403 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||||||||| | || ||||| | ||||| | ||||| || Sbjct 828404 ATTCAGAAAGAATCAACCCTTCACTTGGTACTTCGTTTGAGGGGTGGAAT 828453 Score = 107 bits (118), Expect = 3e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || ||||| ||||| || || | ||| ||||||| Sbjct 827374 ATGCAGATCTTTGTGAAGACCCTTACAGGAAAAACAATCACCCTCGAGGTTGAAGCTTCC 827433 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| | || || || || || |||||||| || |||||||| || Sbjct 827434 GATACAATTGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCACCTGACCAG 827493 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || ||||| || || || | || ||| | |||| | ||||| ||| Sbjct 827494 CAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGAAGAACGCTTTCCGATTACAAT 827553 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||||| ||||||||||| | ||||||||||| Sbjct 827554 ATTCAGAAAGAATCAACGCTTCATTTGGTTTT 827585 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| ||||||| ||||| || ||| | || | ||||| Sbjct 827602 ATGCAGATTTTTGTTAAGACCTTAACAGGAAAAACCATCACTCTCGAAGTCGAAGCTTCA 827661 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| || || |||||||||||||| || || || ||||| Sbjct 827662 GATACTATTGAAAATGTTAAAGCTAAGATCCAAGATAAAGAAGGCATTCCTCCAGATCAG 827721 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || |||||| | || || | | ||| | || || || Sbjct 827722 CAACGTTTGATCTTTGCTGGTAAACAACTCGAAGACGGCAGGACACTCTCCGACTACAAC 827781 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| ||| | || || ||| | || | || || ||||| Sbjct 827782 ATCCAAAAGGAATCTACTCTTCACTTAGTTCTTCGACTTCGTGGAGGTAT 827831 >seq236 Length=119964 Score = 105 bits (116), Expect = 1e-17 Identities = 371/562 (66%), Gaps = 27/562 (5%) Strand=Plus/Minus Query 203112 TATGTTCATTTAGTGTTTTTATTGCCCAATTATTAGCACCATTTATATTATCGTAATTTT 203171 |||| | ||||| || | |||||||| | ||| ||||| | || | |||||| |||| Sbjct 39752 TATGCTGATTTAAAGTATCAATTGCCCATTGATTGGCACCTTCTACAGCATCGTACTTTT 39693 Query 203172 CATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCTTCACAAAAAA 203231 |||| | ||||||||||||| | || |||| | | | ||| |||||||| ||| Sbjct 39692 CATTGTTGAAACAAAAATTATCGCTTAATTCTCTTCTCACAATTGCTTCTTCCATAAATG 39633 Query 203232 CTTCTACCGATTTAGGATATAATTTTTTATATTTGTTAAT--TTCTAATATTATTCTTTG 203289 ||| || || | ||| | || ||| |||| ||||| |||||| || || || Sbjct 39632 TTTCCACAGACTCTTTATACATTTGTTTGTATT--TTAATACTTCTAAAATACATCGCTG 39575 Query 203290 AGTTGAAATTTGACCAAAATGTATCCATGGTGATAAATTACTTATTGCATTAGCAT-TTG 203348 | || || ||||||||| | |||||| || ||||| ||| | ||||| || | | Sbjct 39574 AACGGATATCATACCAAAATGAAACCATGGAGACAAATTGCTTGTAGCATT-GCTTAAAG 39516 Query 203349 GATCATTTCtttttttagcataatcttttaatctattttgtataaatatatctaatattt 203408 ||| || | | | | | | | || | ||| | || ||| | | ||| | | Sbjct 39515 GATTGTTACGCATAGTGTGAAAGTGTGCCAAACGATTATCTAAAAAGCTTTGCAAT-TCT 39457 Query 203409 taaatgcatattttGTA-CCAGATTTTGCCCAAGAAACAGGTTTAACA-TTTCTATCAAT 203466 |||||| || || || | | | | ||||| || ||| ||| |||| || || Sbjct 39456 AAAATGCCACCATTATACCCTGGTATAGTCCAAGGTACTTCTTTCACAGATTCT-TCTAT 39398 Query 203467 ATTTAATGATTGTTC--TGCttttttccaattattatttattttaatatatgtatta--t 203522 || || || || || || | ||||| ||| || ||| ||| | || |||| | Sbjct 39397 ATCCAA--CTTCCTCAGAGCATTCTCCCAATCATTCTT--TTTAAATTTTTG-ATTAGTT 39343 Query 203523 aa----gtatgtttaataataggtataaattCAGTTAAATATTCTGATAATTTATAATTT 203578 || | |||||| | | ||| || | || | ||| ||| ||| || ||||| Sbjct 39342 AAGAAGGAATGTTTTGTGACTGGTGGGAACTGTGTCAGATAATCTTCCAATCTAGAATTT 39283 Query 203579 ATTTTATTTCTAATGGTTTTTGCAGAATATTCTAA--TTTATTACTAGCAATCCAACATG 203636 |||||||| | ||| || ||||||||||| || ||| | || | ||||||||||| Sbjct 39282 ATTTTATTCCGAATTGTACGAGCAGAATATTCCAACTTTTCTGAC--GTAATCCAACATG 39225 Query 203637 GTACAATATTATGTGAATCAAC 203658 ||||||||||||||| ||| || Sbjct 39224 GTACAATATTATGTGCATCGAC 39203 Score = 105 bits (116), Expect = 1e-17 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 202868 ccAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 || ||||||||||| ||||| | ||||||||| || || ||||| || | Sbjct 40110 CCTACATATCCATTGGGATCGCAGCCATCTATACTGTACTTGTCATTCAAGTAAATCGCC 40051 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 | |||||||| || | ||||||||||||||| || || ||||||||||| Sbjct 40050 CATTTGAGAGCTTCTTCAGGATCATGTGTCCATTCTAATATCTTCTTTGCCCAATACATC 39991 Query 202988 CTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAAA 203047 |||||| | |||||||| || || | | | || |||| |||| ||||||||| Sbjct 39990 CTTAAAAAGCCATGCATCTTTCCTTCTTGCACTAACTGGATTTGGGATGAATTCCATAAG 39931 Query 203048 TTGTCATGAGTTAATGCATTTTCAAGTTGATATAAACTATATAT 203091 | ||||||||||| | || || | || || |||| |||| || Sbjct 39930 TCATCATGAGTTAAAGAATGCTCCAATTCATTTAAATTATAAAT 39887 >seq1536 Length=30485 Score = 100 bits (110), Expect = 4e-16 Identities = 216/323 (67%), Gaps = 4/323 (1%) Strand=Plus/Minus Query 205319 tttttatttttaatt----ttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAAT 205374 |||||||| ||| | |||| |||| |||||| | | |||||||| || | | Sbjct 7159 TTTTTATTAATAACTAAAATTGGCAATGATTTTGGTTTTCTACTTAATTGTTCATTAATT 7100 Query 205375 CCATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGT 205434 || ||||||| ||| ||||| |||| ||| | | ||||||||||||| | | Sbjct 7099 TGTGAAAAATGATTACTATAAATATGAGCATCACCTAAAGTATGAATAAATTCTCCTAGC 7040 Query 205435 TTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAAT 205494 | | | || ||||| | ||| || ||||| |||| ||||| |||||| Sbjct 7039 TGATAGCCACATATTTGTGCTAACATTATTGTTAATAATGCATAAGAAGCAATATTAAAA 6980 Query 205495 GGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTA 205554 || || |||||| ||||| || | |||||| | |||||| | | | ||||| | Sbjct 6979 GGAACTCCTAAAAAAATATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCA 6920 Query 205555 TTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCT 205614 | | || | |||||| | ||| |||||| ||||||| ||||||||| || ||| Sbjct 6919 TCAGAAACGTAAAATTGAATTAAAGTATGACATGGTGGTAGTGCCATATTTTTAATTTCT 6860 Query 205615 ATAGGATTCCAGGCTGTTAATAT 205637 |||||| || |||| ||| || Sbjct 6859 GCAGGATTTCATGCTGATAAAAT 6837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755437340236800