Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq236 113 8e-20 >seq236 Length=119964 Score = 113 bits (124), Expect = 8e-20 Identities = 143/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 189436 AACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCA 189495 |||||||||| ||||||| | || ||||| ||| | ||| ||||||||| ||||| Sbjct 39919 AACTCATGATGACTTATGGAATTCATCCCAAATCCAGTTAGTGCAAGAAGGAAAGATGCA 39978 Query 189496 TAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACA-CCTGAAG 189554 | | |||||| | ||||||||||| ||||||||| | |||||||| | | | ||||||| Sbjct 39979 TGGCTTTTTAAGGATGTATTGGGCAAAGAAGATATTAGAATGGAC-ACATGATCCTGAAG 40037 Query 189555 ACGCTTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTA 189614 | ||| | | | || || ||||| |||||||| |||| ||| ||||| | Sbjct 40038 AAGCTCTCAAATGGGCGATTTACTTGAATGACAAGTACAGTATAGATGGCTGCGATCCCA 40097 Query 189615 ACGGATACGTAGGT 189628 | ||||| |||||| Sbjct 40098 ATGGATATGTAGGT 40111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923173997039040