Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq211 140 3e-28 >seq211 Length=255845 Score = 140 bits (154), Expect = 3e-28 Identities = 302/446 (68%), Gaps = 8/446 (2%) Strand=Plus/Minus Query 16271 ATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATA 16330 ||||| ||||| |||||||| || ||||| | || ||||| || | |||||| ||| Sbjct 252210 ATTAATTCGTTGCTGAATGTAAGTCCAGGCATGATACCACGTTTCTTCAGCCAAAAGATA 252151 Query 16331 GCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCA 16390 || || || |||| ||||| || ||||| || || || || |||| || || || Sbjct 252150 GCAGCGAAACTACCACTGAAGAAGATTCCTTCTACCGCTGCGAACGCAATCACACGTTCT 252091 Query 16391 CCGTACGTT-CTAtttttactttcta--tccattttttagcccaatttgctttttgtttA 16447 | | ||| || | | | | | | |||| ||| |||||||| ||||||| | Sbjct 252090 GCAAAAGTTGCTGTGT---CATGCGAAATCCAATTTAAGGCCCAATTGGCTTTTTTAGCA 252034 Query 16448 ACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATA 16507 || ||| | ||||| || ||||| || | | ||| | |||| | || || Sbjct 252033 ACGCAGGGAAGATTCTCGATGGCATTGAAGAGAAAATCCCTCTCTTCGGCATTACTGATG 251974 Query 16508 TAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAA 16567 | || | ||| || | |||||||||||| || | ||| || |||||||| |||||| Sbjct 251973 AATGTGTTTATAAGGAGGGAATACATTTCTGAGTGTACATTTTCAATTGCTATTTGAAAA 251914 Query 16568 CCATAAAAGCATCTAGCTTCGGATATTTGTACTTCA-GAGTAAAACCTTTCTGCTAAGTT 16626 ||||| ||||| | ||||| | || ||| ||||| || | || || |||| ||| || Sbjct 251913 CCATAGAAGCACCGTGCTTCCGTTACTTGGACTTCTTGACTGAA-CCGTTCTACTAGATT 251855 Query 16627 TTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAttttt 16686 || || || || ||||| |||||||||||||| | || || ||||||| Sbjct 251854 CTCATTGACAATACCATCTGATGCTGCAAAAAACGCCAATACATGGGATATAAAATGACG 251795 Query 16687 ttCGTTATCTGAAAGTTTTAACCAGT 16712 ||||| ||||| | |||| ||||| Sbjct 251794 TTCGTCATCTGTTAACTTTACCCAGT 251769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462500575953600