Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq502 132 4e-26 >seq502 Length=146425 Score = 132 bits (146), Expect = 4e-26 Identities = 186/261 (71%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 20043 ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102 |||||| || || || || || || || ||||||| ||| ||||| || || |||||||| Sbjct 100167 ATTTCCATTGTTGACGACAAAGCGTGTCTTTTGGAGAGGGGTTGTGGAGGAATTATTATG 100108 Query 20103 GTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAG 20162 |||||| | |||||| || ||| ||| || || | ||||| ||| | |||||| Sbjct 100107 GTTTATCAGAGGATCGACTAATGCTAAAGAACTGTCAAGTAAAGGTGTTCATATTTGGGA 100048 Query 20163 CGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGA 20222 ||| || | || ||||| || | | ||| | ||| || | | || || || Sbjct 100047 TGCAAATAGTTCACGTGAATTTCTAAATTCCTGTGGCTATGATGACAGGGAGGAAGGTGA 99988 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAA 20282 | | |||||||| ||||||||||||||| || ||||||| || | ||| | || ||||| Sbjct 99987 TCTCGGTCCTGTTTATGGATTTCAATGGCGAAATTTTGGTGCACAGTATATCGATATGAA 99928 Query 20283 CACAAATTATTTTGGACAAGG 20303 ||| |||||| || ||||| Sbjct 99927 CACTGATTATTCAGGGCAAGG 99907 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20347 CCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCT 20406 ||| | |||||||| ||| | | | || ||||| | | |||| | || |||||| Sbjct 99799 CCAGATGACAGAAGGATTTTAATGTCTGCATGGAATCCAATAGATATTCCAAAAATGGCA 99740 Query 20407 TTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAA 20466 ||||||||||||| || |||||||||||| |||| ||||||||||||||| Sbjct 99739 CTGCCTCCATGTCACTGTCTCGTACAATTTTACGTTAGTAATGGAGAATTGTCGTGTCAA 99680 Query 20467 ATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCG 20526 | |||||| || |||||||||||||| || || || || |||||||| || | Sbjct 99679 CTCTATCAAAGAAGTGCTGATATGGGACTAGGAGTGCCATTTAATATTGCTTCGTACTCT 99620 Query 20527 CTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 ||||||| |||||| | |||||||| || | ||| || Sbjct 99619 TTGCTTACTTATATGCTGGCACATGTCACTGGTTTGAA 99582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399174386651320