Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq211 158 1e-33 >seq211 Length=255845 Score = 158 bits (174), Expect = 1e-33 Identities = 287/414 (69%), Gaps = 6/414 (1%) Strand=Plus/Minus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 |||||||||| ||| | |||||| ||||| | ||| ||||| | || ||||| | Sbjct 252224 CCTCATCTCTGGAAATTAATTCGTTGCTGAATGTAAGTCCAGGCATGATACCACGTTTCT 252165 Query 13954 ttAACCAAAATATTGCAGC-AAATGACC-CGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 | | |||||| || ||||| ||| ||| | ||| ||| ||||| || || || || || Sbjct 252164 TCAGCCAAAAGATAGCAGCGAAACTACCACTGAA--GAAGATTCCTTCTACCGCTGCGAA 252107 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 ||| || | |||||| |||| | |||| | | | ||| ||||| ||| ||||| | Sbjct 252106 CGCAATCACACGTTCTGCAAAAGTTGCTGTGTCATGCGAAATCCAATTTAAGGCCCAATT 252047 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTT 14131 | |||||| || | | | || || ||||| || | | | ||| |||||| Sbjct 252046 GGCTTTTTTAGCAACGCAGGGAAGATTCTCGATGGCATTGAAGAGAAAATCCCTCTCTTC 251987 Query 14132 AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCAT 14191 | | | ||| |||| | ||||| | | ||||||||| ||||||| ||||| || Sbjct 251986 GGCATTACTGATGAATGTGTTTATAAGGAGGGAATACATTTCTGAGTGTACATTTTCAAT 251927 Query 14192 AGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC-CGAGTAAAATC 14250 ||||| ||||||||||| ||||| | ||||||| ||| ||||| || | || | Sbjct 251926 TGCTATTTGAAAACCATAGAAGCACCGTGCTTCCGTTACTTGGACTTCTTGACT-GAACC 251868 Query 14251 TTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATA 14304 ||| | | ||| ||||| || |||||||| ||||||||||| ||||||| Sbjct 251867 GTTCTACTAGATTCTCATTGACAATACCATCTGATGCTGCAAAAAACGCCAATA 251814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479716150718400